Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1157
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Entry
HMPREF9228_1157 CDS
T01844
Name
(GenBank) putative ribosomal RNA large subunit methyltransferase J
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbv03009
]
HMPREF9228_1157
Enzymes [BR:
bbv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HMPREF9228_1157
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HMPREF9228_1157
Ribosome biogenesis [BR:
bbv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HMPREF9228_1157
23S rRNA modification factors
HMPREF9228_1157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
TyrRSs_C
Methyltransf_11
S4_2
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
AEF26548
LinkDB
All DBs
Position
complement(1321224..1321997)
Genome browser
AA seq
257 aa
AA seq
DB search
MSEHPIDPAMPLDRLDMMLVASGLVESRSKAQRLIKAGHVRVDGEAITKPSFMVKAGHCE
LAVDKGDDYVSRGAYKLLGAFKAFADDGLTGPQSLECLDIGASTGGFTDVLLRGGAARVV
ALDVGHGQLDPRIAGDSRVIEMSGVNIREVTADDLPYRPAMIVSDVSFISLTYVIPVIAR
IAAPGAQVVLLVKPQFEVGRQGLGKHGIVDDPALREQTLADVVACARQHGLHVVNTADSP
IEGMHGNAEYLLYAVFK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacatccgattgatcccgcaatgccgcttgaccgtcttgacatgatgcttgtg
gcctccggtctcgttgagtcccgatccaaggcgcagcgccttattaaggccggacatgtg
cgtgttgacggagaggccatcaccaagccgtcattcatggtcaaagccggtcattgtgag
cttgccgtggataagggtgatgattatgtctctcgtggcgcttacaagctgcttggcgcg
ttcaaggcctttgccgacgatgggctgaccgggccgcaaagtctggaatgtttggatatc
ggcgcatccaccggtggatttaccgatgtgctactgcgcgggggagcggccagagtcgtg
gccctcgatgtggggcatgggcagcttgacccgcgtattgcaggagatagccgcgtcatc
gaaatgagcggcgtcaatatccgtgaagtcacggccgatgatttgccatatcgcccggcg
atgatcgtgtccgatgtctcgttcatttcactgacctatgtgattccggtgattgcgcgc
atcgccgctcccggcgctcaggtggtgctgctggtcaagccgcagtttgaagtcggtcgg
caaggactcggcaagcatggcattgtggacgatccggcattgcgcgagcagacccttgcc
gatgtcgtcgcctgtgcgcggcagcacgggctgcacgtcgtcaatacggccgacagtccc
attgaaggcatgcacggtaatgcggaatatctgctttatgcggttttcaaatga
DBGET
integrated database retrieval system
