KEGG   Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1221
Entry
HMPREF9228_1221   CDS       T01844                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bbv  Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv00300  Lysine biosynthesis
bbv00470  D-Amino acid metabolism
bbv01100  Metabolic pathways
bbv01110  Biosynthesis of secondary metabolites
bbv01120  Microbial metabolism in diverse environments
bbv01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:bbv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HMPREF9228_1221 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HMPREF9228_1221 (dapF)
Enzymes [BR:bbv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HMPREF9228_1221 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AEF27870
LinkDB
Position
complement(1393490..1394389)
AA seq 299 aa
MSLPQRVTKTHATGNDFVVYLDKTGDFEPTADEIRFLCDRHFGIGGDGLIRLTKPEFVSD
LSDEQIMAVQAGDAEWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRA
GVKILTPRGNVKPYGANVFQVEMGEWKIGETDAYEVTIPGNDGSARGTFVDMGNPHVVAV
IEDAFSALPVVEDLDLVTKPVVNPTIESDQNVEFVRIDDIDHNTAVGEATMRVNERGCGE
TLSCGTGLCATGIVLRAKTGISHWDITVRGGTLRVDVTDEDVKLTGSATLVADIDLLRS
NT seq 900 nt   +upstreamnt  +downstreamnt
atgagtcttccgcaacgagtaactaagacacacgcaaccggcaatgatttcgtggtgtac
ctcgacaaaaccggcgatttcgagcccactgccgatgagatacggttcctgtgcgaccgt
catttcggcattggcggcgatggactgattcgcctgaccaagcctgagttcgtgtctgat
ctgagcgatgagcaaatcatggctgtgcaggcaggtgacgctgaatggttcatggactat
cgcaatgcagacgggtcgttggctgagatgtgcggcaacggcacacgcgccatcacttta
ttcgcccagcgtgagggcgtggctgactccaccgagccgttccgccttggaacccgagcc
ggcgtcaagattctgacccctcgtggcaacgtgaagccgtatggtgccaatgtgttccag
gtggaaatgggggagtggaaaatcggcgagaccgacgcctatgaagtcactattcccggc
aacgatggctcggcacgtggcacgttcgtcgacatgggcaacccgcatgtggtggcggtg
attgaagatgccttctccgcgctgccagtggtcgaggatctggatttggtcaccaagccg
gtggtcaacccaactatcgaatccgatcagaacgtggaattcgtgcgtattgatgatatc
gaccacaacaccgcagtgggtgaggcgacgatgcgtgtcaacgaacgaggctgcggagag
accctctcctgcggtacgggcttgtgcgccacaggcattgtgctacgcgccaagaccggc
atctcacactgggacatcaccgtgcgcggcggcactctgcgagtggacgtgaccgacgag
gacgtcaaactcaccggctcggccacgctggttgccgatatcgatttgctccgttcctga

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