Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1221
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Entry
HMPREF9228_1221 CDS
T01844
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv00300
Lysine biosynthesis
bbv00470
D-Amino acid metabolism
bbv01100
Metabolic pathways
bbv01110
Biosynthesis of secondary metabolites
bbv01120
Microbial metabolism in diverse environments
bbv01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF9228_1221 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF9228_1221 (dapF)
Enzymes [BR:
bbv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HMPREF9228_1221 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AEF27870
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All DBs
Position
complement(1393490..1394389)
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AA seq
299 aa
AA seq
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MSLPQRVTKTHATGNDFVVYLDKTGDFEPTADEIRFLCDRHFGIGGDGLIRLTKPEFVSD
LSDEQIMAVQAGDAEWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRA
GVKILTPRGNVKPYGANVFQVEMGEWKIGETDAYEVTIPGNDGSARGTFVDMGNPHVVAV
IEDAFSALPVVEDLDLVTKPVVNPTIESDQNVEFVRIDDIDHNTAVGEATMRVNERGCGE
TLSCGTGLCATGIVLRAKTGISHWDITVRGGTLRVDVTDEDVKLTGSATLVADIDLLRS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttccgcaacgagtaactaagacacacgcaaccggcaatgatttcgtggtgtac
ctcgacaaaaccggcgatttcgagcccactgccgatgagatacggttcctgtgcgaccgt
catttcggcattggcggcgatggactgattcgcctgaccaagcctgagttcgtgtctgat
ctgagcgatgagcaaatcatggctgtgcaggcaggtgacgctgaatggttcatggactat
cgcaatgcagacgggtcgttggctgagatgtgcggcaacggcacacgcgccatcacttta
ttcgcccagcgtgagggcgtggctgactccaccgagccgttccgccttggaacccgagcc
ggcgtcaagattctgacccctcgtggcaacgtgaagccgtatggtgccaatgtgttccag
gtggaaatgggggagtggaaaatcggcgagaccgacgcctatgaagtcactattcccggc
aacgatggctcggcacgtggcacgttcgtcgacatgggcaacccgcatgtggtggcggtg
attgaagatgccttctccgcgctgccagtggtcgaggatctggatttggtcaccaagccg
gtggtcaacccaactatcgaatccgatcagaacgtggaattcgtgcgtattgatgatatc
gaccacaacaccgcagtgggtgaggcgacgatgcgtgtcaacgaacgaggctgcggagag
accctctcctgcggtacgggcttgtgcgccacaggcattgtgctacgcgccaagaccggc
atctcacactgggacatcaccgtgcgcggcggcactctgcgagtggacgtgaccgacgag
gacgtcaaactcaccggctcggccacgctggttgccgatatcgatttgctccgttcctga
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