Entry |
|
Symbol |
carB
|
Name |
(GenBank) carbamoyl-phosphate synthase, large subunit
|
KO |
|
Organism |
bbv Bifidobacterium breve ACS-071-V-Sch8b
|
Pathway |
bbv00250 | Alanine, aspartate and glutamate metabolism |
bbv01110 | Biosynthesis of secondary metabolites |
|
Module |
bbv_M00051 | De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP |
|
Brite |
KEGG Orthology (KO) [BR:bbv00001]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HMPREF9228_1237 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HMPREF9228_1237 (carB)
00220 Arginine biosynthesis
HMPREF9228_1237 (carB)
Enzymes [BR:bbv01000]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HMPREF9228_1237 (carB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1408241..1411624)
|
AA seq |
1127 aa
MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPIATPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYNVELIGASL
EAIDRGEDRELFKKVVDEAGAESARSRIAHSLEECDKIAEELGYPLVVRPSFTMGGLGSG
IAHDEEELHRIAGAGIHYSPTDEVLIEEGIEGWKEFELELMRDRNDNVVVVCPIENVDPV
GVHTGDSITVAPCFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAIHPKTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIRNDITQSTPASFEPTIDYVVTKVPR
FAFEKFPGADPTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHMGFNWDGDKPSADEV
AELLKAIHTPTEHRYLQLMRAIWGGATLDQLYAATKIDPWFLKQLLLINETAQAVREAET
LTPKLLKKAKLAGLSDVQIAHLRSLGDEGENTIRELRWNYGLKPVYKTVDTCAAEFDAAT
PYYYSCYADETELRPREREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPESIDLAENRELFGEVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSY
VLGGRGMEIVYDDKQLNKYVDRALAEAQADTVVSGRLPSPLLIDKFLQDAIEIDVDALFD
GKELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAIASGCHVQGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIADQRANGLLLPKGDG
GDIHPGQQVAVKESVLPFKRFRTPVGKTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYDGGLPTHGNVFISVNDTDKRQLPLLAVRLEELGFKLWATEGTASVLRRYGIDSNIVDK
ISTRVDTDPEAPVEVHHAAGSVGKNVVQLIEEGKIDMILNTPNSRGSRSDGYSIRAAAIA
ADLPQFTTITEFQAALLAIEAVKHNDYQIMSIQEHSKQLFELEKQEF |
NT seq |
3384 nt +upstreamnt +downstreamnt
atgccgaagcgcaccgacatcaaatccgtgatggtcatcggctccggcccgatcgtgatc
ggtcaggctgctgagttcgattactcgggcacccaggcatgccgcgtccttcgtgaggaa
ggcatccgcgtcatcctcgtcaactccaacccggccaccatcatgactgacccggagatg
gccgacgccacctacatcgagccgatcgccaccccgatcctcgagcagatcatcgccaag
gaacgccccgacgcgctgctgcccaccctcggtggccagaccgcgctgaatgccgccatg
gcgttgggcgaggcaggcgtgctcaagaagtacaatgtcgagctgatcggggcctccctg
gaagccatcgaccgcggcgaggaccgtgagctgttcaagaaggtcgtggacgaggccggt
gccgaatccgcccgttcccgcatcgcgcacagccttgaggaatgcgacaagatcgccgaa
gaactcggctatccgctggtcgtacgcccgagcttcaccatgggtggcctgggctccggc
atcgcccacgacgaagaggagctgcaccgcatcgccggcgccggcatccattactcaccc
accgacgaagtcctgatcgaagagggcatcgaaggctggaaggaattcgagctcgagctc
atgcgcgaccgcaacgacaacgtcgtggtcgtctgcccgattgaaaacgtcgacccggtc
ggcgtgcacaccggtgactccatcaccgtggccccttgcttcaccctgaccgatcgcgaa
taccagaagctgcgtgacatcggcatcgccatcatccgcggcgtgggcgtggacaccggc
ggctgcaacatccagttcgccatccatccgaagaccggtcgcatcatcgtcatcgagatg
aacccgcgtgtttcccgttcctccgctctggcgtccaaggccaccggcttcccgatcgcc
aagatcgccaccaagctggctctcggctacacgctggacgagattcgcaacgacatcacc
cagtccacgccggcctccttcgagccgaccatcgactacgtggtcaccaaggtgccgcgc
ttcgcattcgagaagttcccgggtgccgaccccaccctgaccacctccatgaagtccgtg
ggcgaggccatggctctggccggcaacttccaggagtccctcggcaaggccatgcgctcc
attgacaagcgtcacatgggcttcaactgggacggcgacaagccgtccgcagatgaggta
gctgagttgctcaaggccattcatacgccgaccgaacaccgctatctgcagctcatgcgt
gccatctggggtggcgcaacgctggatcagctgtatgcggccaccaagatcgacccgtgg
ttcctgaagcagctgctgctcatcaacgagactgcacaggccgtgcgcgaggccgagact
ctgaccccgaagctgctcaagaaggcgaagctcgccggcctgtccgacgtgcagatcgcc
catcttcgcagcctcggcgacgaaggcgagaacaccatccgcgaattgcgctggaactat
ggcctcaagcccgtctacaagaccgtcgacacctgtgccgcagagtttgatgcggccacg
ccgtactactacagctgctacgccgatgagaccgaacttcgtccgcgtgagcgcgaggcg
gtcatcatcctgggttccggcccgaaccgcatcggtcagggcatcgagttcgactacacg
tgcgtgcacgccgtgcaggagctcggtaaggactatgacaccatcatggtcaactgcaac
ccggaaaccgtgtccaccgattacgacatgtccgaccgcctctactttgagccgctcacc
ttcgaagacgtgctcgagatctacgaggccgagaagaagatgggcccggtcaagggcgtt
atcgtccagctcggtggccagaccccgctctcgctggccgcacgtctgaaggccgccggt
gtgccgattctcggcaccaccccggagtccatcgacttggccgagaaccgtgagctgttc
ggcgaggtccttaagaaggcggagatgaatgccccgcgttacggcactgccctgagcctc
gaagaggccaaggaagccgcacatcgcatcggctatccggtgctggtgcgcccgagctac
gttctcggtggccgcggcatggaaatcgtttatgacgacaagcagctcaacaagtacgtg
gatcgcgcgcttgccgaggcccaggccgatactgtggtctctggccgtctgccctccccg
ttgctgatcgataagttcctgcaggatgccatcgaaatcgatgtcgatgcgctgttcgac
ggcaaggagctgtacatcggcggcattatggaacacgtcgaggaagccggcgtccattcc
ggcgacgccgcctgcaccctgccgccgtctacgctgtccgacgaccagattcgccgtctg
cgcgaaggcacctacgccatcgcctccggctgccacgtgcagggtctgatcaacgtgcag
tacgccttcatggccaacacgctgtacgtcatcgaagccaacccgcgtgcttcccgtacc
gtgccgttcgcctccaaggccaccggtgtggctctggccaaggccgccgctcgcattatg
gccggcgagaccattgccgaccagcgcgccaacggtctgctgctacccaagggcgacggt
ggcgacatccaccccggccagcaggtcgcggtcaaggaatccgtgctgccgttcaagcgt
ttccgcactccggtgggcaagaccgtcgacattctgctcggacctgagatgcgttccacc
ggtgaggtcatgggcttcgaccgtgacttcccgcacgccttcgccaagagccagctcgcc
gcctatgacggtggcctgccgacccacggcaacgtgttcatctccgtgaacgacactgac
aagcgacagctgccgctgctcgcagtgcgcctcgaagagcttggcttcaagctttgggcc
actgagggcaccgcttccgtgctgcgccgttacggcatcgactcaaacatcgtggacaag
atcagcacccgtgtggacaccgatccggaagctccggttgaggtgcatcatgccgccgga
tccgtgggcaagaatgtggttcagctcatcgaagagggcaagatcgacatgattctcaac
acgccgaactcccgcggctcccgctccgatggctactccatccgcgccgccgccatcgcc
gccgatttgccgcagttcaccaccattaccgagttccaagccgcactgctcgccatcgag
gccgtgaagcataatgattatcagatcatgagcatccaggagcattcgaagcagctgttc
gaattggagaaacaggagttctga |