Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1259
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Entry
HMPREF9228_1259 CDS
T01844
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbv03000
]
HMPREF9228_1259
Transcription factors [BR:
bbv03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HMPREF9228_1259
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
HTH_31
HTH_26
TetR_N
MarR_2
HTH_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEF26494
LinkDB
All DBs
Position
complement(1436426..1437442)
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AA seq
338 aa
AA seq
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MGKAKVTISDVARAAGVSSSAVSYALNDKPGVSSETREKVLRVAETMGWKPNSAAKALSD
ASTRSIGLVLSMNPEVFAVESYAMALIAGLGTELEKRDYSLLLRIVPDTSSALRIHRNWI
ASGSVDAALVTNVEIGDPRIELYKEHPESPVLVIADPSVTKGLPTLSSDEAHGARQIVDC
LHELGHRHIARIAGPERFAHTFVRDRIFNEETVALGMRYDCLHSDYTPEQGGECTSRLLS
FPDSPTAIVYDNDVMAIEGMRVALEQGLSVPDDISIVSWDDSFMCTVTTPSITALWRDIP
RLGSRAVPMLFKQIDGEKVSNATESPYELMVRDSVAPP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggccaaggtcaccatttcagacgtcgcgcgggcggccggcgtctccagcagt
gccgtctcgtatgcgctgaacgacaagcccggcgtctccagcgagacccgtgaaaaggtg
ttgcgagtcgctgaaacgatggggtggaagccgaacagcgctgccaaggcattatccgat
gcgagcacacggtcgatcggtctggtgctgagcatgaatcccgaggtgttcgccgtggag
tcgtatgcgatggcactcatcgccggtctgggcaccgaactggaaaagcgcgactattcg
ctgctgctgcgcatcgtgccggacacaagcagcgctttgcgcatccatcgcaattggatt
gcttccggcagcgtggacgccgccttggtcaccaatgtggaaatcggcgatcctcgaatc
gagctgtataaggaacatcccgaatcgccggtgttggtgatcgccgacccatccgtgacc
aaagggttgccgacgctgtcgagtgatgaggcccacggtgcgcggcagattgtcgactgt
ctgcatgagctggggcaccggcacattgcacgtattgccggaccggaacgctttgcgcac
acgttcgtgcgtgaccgtattttcaacgaggagaccgtggcgctgggcatgcgctacgat
tgcctgcactcggactacacgccggagcagggcggagaatgcacctcccgcctgctttca
ttccccgattcgcccacggcgattgtgtacgacaatgacgtgatggccatcgaaggcatg
cgcgtggccttggaacaggggttgagcgtgccggatgacatctccatcgtgtcatgggac
gattcgttcatgtgcaccgttacgacaccgtccatcaccgcgctgtggcgggatattccc
cgcttgggcagccgtgcggtgcctatgctgttcaagcagattgatggcgaaaaggtgtct
aacgccaccgaatcaccatatgaattgatggtgcgtgattccgtggcgcccccgtga
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