Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1493
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Entry
HMPREF9228_1493 CDS
T01844
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF9228_1493 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_1493 (xseA)
Enzymes [BR:
bbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HMPREF9228_1493 (xseA)
DNA repair and recombination proteins [BR:
bbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HMPREF9228_1493 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
UBA
Motif
Other DBs
NCBI-ProteinID:
AEF26880
LinkDB
All DBs
Position
1724925..1726280
Genome browser
AA seq
451 aa
AA seq
DB search
MGYSNTGQSPTAASLASAGFGPNTATEAGQGTVNLPDGPRPVDQLPRLAAETTAQNPWPV
SMLSQKFYGAVERWPSAWVTGQITQINTRRAGSAYITLRDDFEDIAMEVNGFGRFADTAR
QFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLKDMIDELRKRLKGEGLFDADH
KLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPGEVAQAIAR
LDTDPDVDVIIVARGGGSFEDLMGFSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADL
RASTPTDAAKRVVPDVNEQTQLITGAIDRMRLRIRSRVDNEDRLIEGYANRPSLTQPLTM
LEPHQRLIDDSIQRLDIGLRRIVDDAQLTVEKAHASLTALSPQSTLNRGYAVVQSADGTV
LDDASTAHIGDDITVTLKKGVITATTTSAAA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggttactcgaacacgggccagtcgccgaccgccgcatctttggcctcggccggtttt
ggccccaacacggccaccgaagccgggcagggaaccgtcaacctgcccgacggcccgcgg
ccggtcgaccagctcccaaggcttgccgcagagaccaccgcgcagaatccctggccggtc
agcatgctgagccagaaattctatggggcggtggagcgctggccgtccgcgtgggtcacg
ggccagattacccagatcaacaccagacgggccggttcggcgtatatcaccctgcgcgac
gatttcgaagacatcgcaatggaggtcaatggctttggacggtttgccgacacggcccgg
caattcgttcaaggcgatcgcgtggtcattcacggcaagcccaacctgtggatgaagcgc
acctccctctctttgcgcggagacaccattcttaaagtcggcgcaggtggcagcctcaag
gacatgatcgacgaattgcgcaagcgactcaaaggagaaggcctatttgacgcagaccat
aaactccctctgcccgaatttcccaagaccattggcctaatttgcgccccacaggcacga
gccgagggagatgtcatcactaacgtgaatcttcgctggccctcggtcaccttcaaggtt
gttcatgtgcatgtgcaaggtgagcaatgccccggcgaagtcgcacaagcgattgcacga
ctagacaccgatccagatgtggatgtcattatcgtggctcgaggaggcggctcattcgag
gacctcatgggcttctcggatgaacgcgtagtgcgtgccgcatatgcctgtaccacacca
ttgatttcctccatcggacatgaagacgattggaccctcctggacctggttgccgacctg
cgtgcttcaacccctacggacgcggccaaacgtgtggtgccggacgtcaacgaacagacg
cagctcattaccggagccatcgaccgtatgcgtctgagaattcgctcacgagtggataac
gaagatcgcctcatcgagggatacgcaaaccgccccagcctgacgcaacctctcaccatg
ctggagccgcatcagcgcttgattgacgattccatacagcgccttgatatcggcctgcga
agaatcgtggacgacgctcagctcaccgtcgagaaggcgcatgcctcactgaccgccctc
agcccccagtccacactcaaccgtggctatgccgtggtgcaatccgccgatggcaccgta
ctcgatgacgcttccaccgctcatatcggagacgacatcaccgtaaccttgaagaagggt
gtcatcacagccacaaccacatccgccgcagcgtaa
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