Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1504
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Entry
HMPREF9228_1504 CDS
T01844
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_1504 (vsr)
DNA repair and recombination proteins [BR:
bbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HMPREF9228_1504 (vsr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
PNP_phzG_C
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AEF28125
LinkDB
All DBs
Position
complement(1735450..1735923)
Genome browser
AA seq
157 aa
AA seq
DB search
MSRKKQPVEKYERGTRSYTMSHIRGKDTKIEVLVRSYLFRRGLRFRKNDKRYPGHPDVVL
PKYHTIVFVNGCFWHMHEGCSKRSMPKSNVEFWQAKLLRNHNRDIAQRAELEASGWRVIT
VWECELTKAVRDGRLARLYEQIVCPSGFPLEGSCRRR
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgtaagaagcagccagtggaaaagtatgaacggggcacccgctcgtacacgatg
tcgcatattcgcggcaaagacaccaaaatcgaggtgctggtacgcagctatctgttccgc
aggggcctgagattccgcaagaacgacaagcgctacccgggccatccggacgtggtactg
ccgaaataccacaccatcgtgttcgtcaacggctgtttctggcatatgcatgaaggctgt
tccaaacgttcgatgccgaagtcgaatgtggaattctggcaggcgaaactgttgcgcaac
cacaatcgagacatcgcccagcgcgccgaattagaggcctccggctggcgtgtgatcacc
gtgtgggagtgcgaattgacaaaagccgtgcgagacgggcgtctcgcacggctatacgaa
cagattgtgtgtccttctggcttcccgctggaggggagctgtcgccgcaggtga
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