Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1506
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Entry
HMPREF9228_1506 CDS
T01844
Name
(GenBank) SNF2 family N-terminal domain protein
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
SWIM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AEF27719
LinkDB
All DBs
Position
complement(1736626..1740690)
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AA seq
1354 aa
AA seq
DB search
MNNGYGVFGHVPDDASHGGGDSDYEDDNAAWGNGLRRRNPWKSANADGDESMLPDDGDFV
GVDDDGNDDVAFGSAGSLSAEDAVVPYSQSRRPGRSVWFDDEDEINGLNEQGVRQVPIAA
LRRDVETSTSNAVLARARVIARKAASMLIDPTYDENRRTGYAELGAMMRGTTSPSSRYRV
NLQFDLDTGEVAGGDCTCPAYGRGYGICKHMAALALMFCDEPQRFKGYHAGAVRPSRALL
DYMERADKQDAQVRARRRSAVMQRFDGGGTAGRGVSSHRNRTGYGSGMGGYQGLRETVSV
GQVRLTPILSFIDGTWSVEFKIGSAINSSSYVLKSVPQFVRAMTNGDHEDYGQKLAFTHT
PDMLDADSRPLLRFLKSALAIRHAAEQQDRYYGRIAIDRHLTLSETEVASLLILRENVGV
QLVLDTWFSSQPSPVSVGGEPNLTMHIVRRDSRMFGSEAGYLLTGTPSVETVINGDRESW
LLLAPSEPLAYTSAMMAKSRRKSAAGYRFVRCPKQFGPIAELIGELFAPDSEGQVIAGDD
SALFARTLLPQLVNVDMLAADDIPRELAELSPAECHVGFYLDRTENGVECEAKARYGNVM
VPLLPAGPAVSADDGGMPVAVPGRDLDTEHLALDVVSEFFSMPEEQRRKLAETRQATAGF
RTPASRAKARARASEAAVINRDDTTQIIRLFDEGLPALHEVGEVFTTPAFDRLIAPKPPS
VKVGLSIKGNLVEISPIADEVPPDEVGALLVSYRRRQRYHQLKDGTLLKLEGANLNTLDT
LAADLDLDEQQLNSGLIELPGGRAFLLDGELPDDGSDVVKDASFTEYIDDLKIIDPESYE
VPDSLKPVLRPYQVEGFRWLNALCDKGFGGILADEMGLGKSVQLIALLLSRYRKPGSADG
AIVEPSLIVCPASLVYNWAAEFAKFAPSCNAMVVAGTKSERRTAIGRAFRADEPTVLITS
YDLLRRDVDDYTADERRFNVMALDEAQYIKNHTTKIAKAAKAVAADHRFALTGTPIENRL
SELWSIFDFLMPGLLGTYKRFHERYELPISNARAVDSSTEEGRAAAQVNPEAARVSHQLQ
SLVGVFIKRRLKSQVLTDLPDKLETTLTVQLAGEQRKLYAAHEQRLRMQLEHSEEADFNT
SKIRILAELTRLRQICCDPRLLYADAKDQSAKLAAIAELVETCVNEGKKALIFSQFTSFL
DLIAERFDAQGLRYYTITGSTPKRKRLELVDQFNADDTPAFLISLKAGNTGLNLTGASVV
IHADPWWNAAAQDQAADRAHRIGQTEDVNVYQVVAKDTIEERILELQHTKSELARQFTDA
SPLADETGTGTTVFAEAPASIATLTRDDLLDLLG
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgaataacggatacggcgtattcgggcatgttcctgacgatgcctcccatggcggcggc
gactccgattacgaagatgacaatgcggcttggggcaatgggctgaggcgtcgcaatccg
tggaagagcgcgaatgcggatggtgacgaatccatgttgcccgatgacggcgatttcgtt
ggtgttgatgatgatggcaatgatgatgtggcattcggctcggctggatcactcagtgcg
gaggatgcggttgttccttatagccagtcacgtcggccgggtcgctccgtgtggttcgat
gacgaggatgagattaacggcctgaatgagcaaggtgtccggcaggtgcctattgcggca
ttacgccgtgacgtggaaacctccacctcgaacgccgtattggcccgtgcccgcgtcatc
gcgcgcaaagcggccagtatgctcatcgaccccacctatgacgagaatcggcgtaccgga
tatgccgaactcggcgccatgatgcgcggcaccaccagtccctccagccggtatcgcgtc
aatctgcagttcgaccttgacaccggggaagtggctggcggtgattgcacctgcccggct
tatggacgcgggtatggcatttgcaagcatatggcggctctcgctttgatgttctgcgat
gagccacaacgattcaagggataccatgccggtgccgtgcggccttcgcgcgcgttgctt
gactacatggaacgcgcggataagcaggatgcgcaggtcagggctcgtcgacgcagcgcc
gtcatgcaacggtttgatggcggcggtacggctgggcgcggtgtctccagccaccgcaat
cggaccgggtatggttccggaatgggcggatatcagggtttgcgtgaaaccgtctcggtt
ggccaggtcaggcttactcccatcctgagcttcatcgatggtacctggagtgtggaattc
aagattggctcagccataaactcctccagctatgtgctgaaatccgtcccacaattcgtg
cgggccatgaccaacggcgatcatgaggattacgggcagaaactggcgttcacgcatacg
ccggatatgcttgatgcggattcccgcccattgctgagattcctgaaatccgcgctcgcc
atacgtcacgcggccgaacagcaggatcggtattacgggcgtattgccattgaccgtcac
ctgacactatccgagacggaagtggcttcgctattgattttgcgtgaaaacgtaggcgtg
caactggtgctggacacctggttttccagccagccttcgccggtatcggttggcggggaa
ccaaacctgaccatgcatatcgtcagacgcgattcccgtatgttcgggtcggaagccggg
tatttgctgactggaacgccttcggtggagaccgtcatcaatggcgaccgtgaatcttgg
ctgttgctcgcaccgtccgagcctttggcttacacctccgccatgatggcaaagtcgcgg
cgcaaaagtgccgcaggataccggttcgtccgttgcccgaagcaattcggtccgattgcg
gaacttatcggtgagctgtttgcgccagacagtgaggggcaggtcatcgccggagacgat
tcggctctgttcgcccgcacgttattgccgcaactggtgaatgtagacatgcttgccgcc
gatgatatcccgcgtgaacttgctgagctgagtcctgccgagtgccatgttgggttctat
ctggatcgtacggaaaacggcgtggaatgcgaggccaaggcccgctatgggaatgtaatg
gtgccgctgctgccggctgggcccgctgtgagcgccgacgatggcggcatgccggtcgcg
gtgcctggccgtgaccttgataccgaacatctggctcttgacgtggtgagtgagttcttc
tccatgcctgaggagcagcggcgcaagttggccgaaaccagacaggcgactgccggattc
aggaccccggcatcccgcgccaaggcccgcgcgcgtgcgtccgaggccgccgtcatcaac
cgtgatgacaccacacagattatccgcttgttcgatgaaggtctgccggcgttgcatgag
gtgggagaggtgttcaccacgcctgcgttcgaccgcctcatcgcacccaagccgccgagc
gtcaaagtcggtttgtccatcaagggcaatctggtggagatctcgcccattgccgatgaa
gtgccgcctgacgaggtcggtgccttgctcgtatcctatcggcgtcgtcagcgctatcac
cagttgaaggacggtacgctgctcaaacttgagggcgcaaacctgaatacgcttgatacg
ctggctgccgatcttgatttggacgagcagcagctcaattccgggctgattgaattaccg
ggcggcagagcatttctgctggacggtgaactgccggatgacggttccgatgtggtcaag
gatgcatctttcaccgaatacattgacgacctcaaaatcatcgaccccgaatcatacgag
gtgccggacagcctcaagcccgttctccgcccgtatcaggtcgagggcttccggtggctg
aacgccttgtgcgacaaaggattcggtggcattcttgccgacgaaatgggactgggcaaa
tccgtacagctcatcgccctgttgttgtctcgctatcggaagccgggtagtgcggatggc
gcgattgtggaaccttcgcttattgtctgcccggcatcgttggtatacaactgggctgcc
gagtttgccaaatttgcccccagctgtaatgccatggtcgttgccggcaccaaatccgag
cgtcgcactgccataggccgtgcgttccgtgcggatgagcccactgtgctcatcacctca
tacgatttgctgcgccgggatgtagacgactacaccgcagatgagcgacgtttcaacgtc
atggctctggatgaggctcaatacatcaaaaaccacaccaccaaaattgccaaagcggct
aaggccgtagcggcggaccatcgttttgctttgaccggcacgccgatcgagaaccgactt
tccgaattgtggagcattttcgatttcctcatgcccggcttgctcggcacgtacaagcgg
ttccatgaacggtatgaactgcccatctccaacgcgagagccgtggattccagtaccgaa
gaaggccgtgccgctgctcaggtcaatcccgaggcggcacgggtgtcccaccaattgcag
tcgctggtgggcgtgttcattaagcgcaggctgaagtcccaagtgctgaccgacctaccg
gacaagctggaaaccacgctgaccgtgcaacttgccggcgaacagcgcaagctgtatgcg
gctcacgagcagcgcctgcgcatgcagctcgaacacagcgaggaggcggacttcaacacc
tcgaagattcgtatcctcgccgagctgaccagactgcgccagatctgctgcgatccaagg
ttgctgtacgccgatgccaaagaccagtcggccaagctcgcggccatcgccgagctggtg
gagacctgcgtgaacgaaggcaagaaggcgctgatcttctcccagttcaccagtttcctt
gatctgatcgccgaacgtttcgacgcgcaaggcctgcgctactacaccatcaccggttcc
acgcccaaaaggaagcgcctcgaactcgtcgaccagttcaacgcggacgatacgcccgct
ttcctgatttcattgaaggctggcaacactggtctgaacctcaccggcgccagcgtggtc
atccacgccgacccatggtggaacgccgccgcccaggatcaggccgccgatcgagcccat
cgcatcggccagaccgaagacgtcaacgtgtaccaggtggtggccaaggacaccattgaa
gaacgcatcttggagcttcagcacaccaagagcgaacttgcccgccagttcaccgatgcc
tccccgctcgccgacgaaaccggcaccggcaccactgtctttgccgaagcccctgcctct
atcgccaccctcaccagggacgaccttctcgatctgttgggatga
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