Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1517
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Entry
HMPREF9228_1517 CDS
T01844
Name
(GenBank) hypothetical protein
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbv03032
]
HMPREF9228_1517
03029 Mitochondrial biogenesis [BR:
bbv03029
]
HMPREF9228_1517
Enzymes [BR:
bbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HMPREF9228_1517
DNA replication proteins [BR:
bbv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
HMPREF9228_1517
Mitochondrial biogenesis [BR:
bbv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
HMPREF9228_1517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
Viral_helicase1
AAA_16
DEAD
nSTAND3
AAA_5
SH3_13
NTPase_1
TrwB_AAD_bind
IstB_IS21
AAA
AAA_11
MeaB
SLFN-g3_helicase
AAA_14
Herpes_Helicase
ATPase_2
AAA_24
cobW
KdpD
ABC_tran
NAT10_TcmA_helicase
Zeta_toxin
P-loop_TraG
TsaE
AAA_25
AAA_7
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEF27769
LinkDB
All DBs
Position
complement(1752096..1753628)
Genome browser
AA seq
510 aa
AA seq
DB search
MAPSLRGAVERSETEGSHGCVRLPSVSSAQRVEPREVDMRQTEALAILNAGANVFLTGAP
GAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQTIHSWSGVGVATSLTSSLLKLI
KSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVRRDPRPFGGIQVVLSGDLFQLPP
VSVSGRNRDLIEPTPEFIASRERYARAGLNPESFITESLVWQELNPVICYLTEQHRQDTG
ELLTVLTDIREGDVTQSDRDALVTRLGKLPEPGQVAVHLFPVNRQADNLNDMRLNQIMLE
PHEFHAETAGPANLVDRLKKNMLAPERLVLKEGAAVMALRNDPDRQYVNGSLGTVRGFAQ
ENKGGWPIVEFENGNIVTMKQAKWEMMDGETVLASVAQVPLRCAWGITIHKSQGMTLDRA
VMDLKRTFAPGMGYVALSRVESLGGLYLAGVNERMFLVSPDAVVLDGDLREASASASDQL
ADEGAGAFKPTEPDEFAADPNDEFAQDALF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttggctccctctctgaggggagctgtcgaacgaagtgagactgaggggagtcacggatgc
gtacgactcccctcagtcagctccgctcaaagagtggagcctagagaggttgatatgcgc
caaaccgaagccctggccattctgaacgccggcgcgaacgtgttcctgaccggtgcgccc
ggtgccggtaagacctacgtgctcaacgagttcatccggcaggcgcgtgccgacggggcg
agcgtggccgtcactgcgtccacaggcatagcctccacgcatatcaatggccagaccatt
cactcatggagtggtgtgggtgtggcgacaagtctgacctccagtctgctcaagctcatc
aaatcccgccgcaaacgcaagattcaggccacggatattctcgtcattgacgaggtctcc
atgctgcacgcctggctgtttgacatggttgaccaagtctgccgcgaggtccgtcgcgat
ccacggccgttcggcggcatccaggtcgtgctgtccggagatttgtttcagctgcctccg
gtctcggtatccggccgcaaccgcgacctcatcgaacccacaccggaattcatcgccagc
cgtgaacggtatgcccgtgccggtcttaatccggaaagctttatcaccgaatcgctggtg
tggcaggaactcaacccggtgatctgctacctcaccgagcagcatcgtcaagacaccggt
gagcttctgaccgtgcttactgacattcgcgaaggcgacgtgacccagtccgaccgtgac
gcactcgtcacgcgtttgggcaagctgcccgagcccggccaagtggccgtccatctcttc
cccgtgaaccgtcaggccgacaatctcaacgacatgcggctgaaccagatcatgctcgag
cctcatgagttccatgccgaaaccgcaggaccggccaatctggtcgatcggctcaagaag
aacatgctcgcccccgagcggctcgtgctcaaggaaggcgcggccgtcatggctctgcgc
aatgaccccgaccgtcagtatgtcaatggttcgctcggcactgtgcgcggttttgcgcag
gagaacaaaggcggttggccgattgtggaattcgagaacggcaatatcgtcaccatgaaa
caggccaagtgggagatgatggatggcgagacggtgctcgcttccgtggctcaggtgccg
ttgcgctgcgcgtggggcatcaccatccacaagtcacagggtatgacgctcgatcgcgcg
gttatggacttgaagaggaccttcgcgccgggcatgggatatgtggcgctctcccgagtt
gaatcattgggcggactgtatttggctggtgtcaacgagcgcatgttccttgtctcaccc
gatgccgtggtgcttgacggcgacctgcgcgaggcctcggcctcggcctccgaccagttg
gccgatgaaggcgcaggcgcattcaaacccaccgagccagacgaattcgccgccgatccc
aatgacgaattcgcccaagacgccttgttctga
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