Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1667
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Entry
HMPREF9228_1667 CDS
T01844
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbv03016
]
HMPREF9228_1667 (truA)
Enzymes [BR:
bbv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HMPREF9228_1667 (truA)
Transfer RNA biogenesis [BR:
bbv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF9228_1667 (truA)
Prokaryotic type
HMPREF9228_1667 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEF28085
LinkDB
All DBs
Position
complement(1913897..1914808)
Genome browser
AA seq
303 aa
AA seq
DB search
MTRLRIDLAYDGGGFYGWAKQPELRTVQGTIEDALHKVLRVPVGDEREPLRLTVAGRTDT
GVHASHQVAHLDVSDETLARCQGHMDVPLTEALARRLKAVLPADIVIHGIAIAPQGFDAR
FSALERTYVYRVADRSSEVDPRLRGCVLRVDESLDLDAMNAAAAMTIGLHDFGSFATPNP
GGTTIREVKTAYWRRVPVASLVPDVLAENEAYRTPSLESGLVVFTIVADAFARNMVRSLV
GSSIKVGSGRKTLEWFADKMANPVREGSSGPIAPQGLTLEHIEYPADDQLAARAEAIRAV
RTL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacacgactacgcatcgaccttgcctatgacggcggcggattctacggctgggccaag
cagcctgagctgcgcacggtgcagggaactatcgaggatgcgttgcacaaggtgctgcgt
gtgccggtcggtgacgagagagagccgctgcgactgactgtggccggtcgtacggatacc
ggtgtgcacgcttcgcatcaggtggcgcatctggatgtgtctgatgaaacacttgctcgt
tgccaggggcatatggatgtgccgctgaccgaagcattggctcgcaggcttaaggccgtg
ctgcctgctgacattgtgattcacggcatcgccattgcgccgcagggattcgatgcgcgg
ttctccgcgttggagcgcacgtatgtgtaccgtgttgccgaccgttcatccgaagtggac
ccccggctgcgcggctgtgtactgcgcgtggatgagtcgctggatttggatgcgatgaat
gccgctgccgccatgaccattggcctgcatgattttggttcgtttgccacgccgaatccg
ggtggtaccacgattcgtgaagtcaagacggcctactggcgccgagtgccggttgcctcg
ttggtgccagacgtattggctgagaacgaggcataccggacgccgtcgctggaatccggc
ttggttgtattcacgattgtggccgatgcttttgctcgcaatatggttcgttcgctggtc
ggttcctcgatcaaggttggttcggggcgcaaaacgctggaatggtttgcggacaagatg
gccaatccggtgcgagaggggtcaagcgggccaatcgcaccgcaagggctgactctggaa
catatcgaatatccggcggatgaccagttggctgctcgtgccgaagccattcgtgccgta
cgtactttgtag
DBGET
integrated database retrieval system
