Bdellovibrio bacteriovorus W: BDW_00280
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Entry
BDW_00280 CDS
T03036
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bbw
Bdellovibrio bacteriovorus W
Pathway
bbw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDW_00280 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbw03021
]
BDW_00280 (rho)
03019 Messenger RNA biogenesis [BR:
bbw03019
]
BDW_00280 (rho)
Transcription machinery [BR:
bbw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BDW_00280 (rho)
Messenger RNA biogenesis [BR:
bbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BDW_00280 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA
AAA_22
NACHT
ATPase_2
Spore_III_AA
S1CSD-TOTE-2
ResIII
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AHI04566
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All DBs
Position
55787..57532
Genome browser
AA seq
581 aa
AA seq
DB search
MSEPKDSQGVEVVKKRTRVKASPTAEETKAKSEDTGSSSAPSPAENNSPAAAASAPSPES
TPEAATAAAPTEQQQQNQRMDRPQRREFRPNNRDNRDNRDRNNGGRGGHRHDRNDSRRDF
RNDRHDKYRDEGQPQGDDGHSNPPVQTQEVDLADIQLTDEEKTWLSSKDLKSKNITQLTE
LATKLKIENAAGMRRQDMIFEILKRAAKLGQDIYGSGVLEILPDGYGFLRSPDYNYLPGP
DDIYVSPSQIRRFGLRTGDTVTGTVRPPKEGERYFALLKVDSLNFETTEKGKDKILFDNL
TPLYPNERLKLEHTPSDYTTRVVDLMAPLGKGQRALIVAPPRTGKTVLMQQIANAITTNH
PEVKLIVLLIDERPEEVTDMQRTVKGEVVSSTFDEPPTRHVQVAEMVIEKAKRLVEHKHD
VVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKRFFGAARNIEEGGSLTIIATA
LIDTGSRMDEVIFEEFKGTGNAEIHLDRKLMEKRIFPCMDINKSGTRKEDLLVEKADLNR
LWILRKVLAPMNVVDAMEFLLDKVENTKTNADFLKAMSGPT
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaacctaaagattcacaaggcgtagaagtcgttaaaaaacgcacgcgagttaaa
gcgagtccaacggcagaagagactaaagccaaaagcgaagacactggcagctcatcagcc
ccaagccctgcagaaaacaactccccagccgcagcagcctcagccccatctccggaaagt
actccagaagccgcaacagccgcagcacctactgaacaacagcaacaaaatcaaagaatg
gatcgcccgcaacgccgcgagttcagacctaataatcgtgataacagagataatagagat
agaaataacggtggtcgcggtggtcacagacacgatcgcaacgattctcgccgtgatttc
agaaatgatcgccacgataaatatcgcgatgaaggtcaaccgcaaggtgatgatggtcac
tcaaaccctcctgtgcaaacacaagaggtggatcttgctgatattcagctgacagacgaa
gaaaaaacatggctatcgtcaaaagatcttaaatctaaaaacatcacgcaactaactgag
cttgcaacaaagctaaaaatcgaaaacgccgcaggtatgcgccgtcaagatatgatcttt
gagatcttaaaacgtgccgcaaagcttggccaagatatctatggatcgggtgttttagaa
atccttccagatggatacggattcttaagatctcctgactataactatcttccaggaccg
gatgatatttatgtaagcccatcgcaaattcgccgttttggcttaagaacgggcgacact
gttacgggaacggtacgtcctccaaaagagggcgagagatattttgcacttttaaaagtt
gattcgctgaatttcgaaacaactgaaaaaggaaaagataaaattcttttcgacaactta
actcctctatatccaaatgagagacttaagcttgagcatactcctagtgactacacgact
cgcgttgttgatttgatggcgccacttggaaaaggtcaaagagcgttgatcgttgctccg
ccaagaacaggtaaaactgttttaatgcagcaaattgctaacgccattacgacaaatcat
cctgaggtaaagctgattgttctattgatcgatgaacgccctgaggaagtcaccgacatg
caaagaactgtgaaaggcgaagttgtttcatcaacgtttgatgagccacctacacgtcac
gttcaggttgcagagatggttatcgaaaaagcaaaacgtcttgtggagcataagcatgac
gtggtgatccttctggattcaatcactcgtttggcgcgcgcttacaatacggttgttcct
ccatcaggtaagatcttatcggggggtgtggattctaatgctcttcacaaaccgaagcgt
ttctttggtgctgccagaaacattgaagagggtggttctttaacaatcatcgcaacggct
cttatcgataccggatcgcgtatggatgaagttatctttgaggaatttaaaggtactggt
aatgcggagattcatttggatcgtaagcttatggaaaaacgtatcttcccttgcatggac
atcaataaatcaggcactcgtaaagaggaccttcttgtagaaaaagcagatctaaaccgc
ctgtggattctaagaaaagttctagcgccgatgaacgttgttgatgcgatggagttcttg
ttagataaagttgaaaacacgaagacaaatgcggatttcttgaaagcgatgtctggacct
acataa
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