Bdellovibrio bacteriovorus W: BDW_00420
Help
Entry
BDW_00420 CDS
T03036
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bbw
Bdellovibrio bacteriovorus W
Pathway
bbw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDW_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbw03019
]
BDW_00420
03110 Chaperones and folding catalysts [BR:
bbw03110
]
BDW_00420
03029 Mitochondrial biogenesis [BR:
bbw03029
]
BDW_00420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbw04147
]
BDW_00420
Enzymes [BR:
bbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BDW_00420
Messenger RNA biogenesis [BR:
bbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BDW_00420
Chaperones and folding catalysts [BR:
bbw03110
]
Heat shock proteins
HSP60 / Chaperonin
BDW_00420
Mitochondrial biogenesis [BR:
bbw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BDW_00420
Exosome [BR:
bbw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BDW_00420
Exosomal proteins of other body fluids (saliva and urine)
BDW_00420
Exosomal proteins of breast cancer cells
BDW_00420
Exosomal proteins of colorectal cancer cells
BDW_00420
Exosomal proteins of bladder cancer cells
BDW_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHI04594
LinkDB
All DBs
Position
85247..86881
Genome browser
AA seq
544 aa
AA seq
DB search
MLVFSEEARAHILKGVNTLANAVKVTLGPKGRNVVIDKSFGSPLITKDGVTVAKEIELEN
KFENMGAQMVKEVASKTNDEAGDGTTTATVLAQAIYREGAKLVTAGHNPMAIKRGIDKAV
TIVIDELKKMAKPVKGSNEVAQVGSISANNDKEIGTMLADAMDKVGREGVITIEESKTAK
TEVTVVEGMQFDRGYLSPYFVTNAERMEAVLENAYVLVYDKKISSMKDMINILEGVAKQG
RQLLIIAEDVEGEALATLVVNKLRGTLHICAVKAPGFGDRRKSMLEDIAILTGAKVISED
MGRKLEQATIEDLGVAKRVVVDKDNTTVIDGAGKKADISARVASIKAQIEETSSDYDKEK
LKERLAKLAGGVAVIHVGAPSEVEMKEKKHRVEDALNATRAAVEEGIVAGGGTSLLRASM
AIEKSQFGEEEQFGAMIIKRACEEPIRQISANAGLDGAIVLDRILQNKSVSWGFNAYSDE
YTDLIKDGVIDPVKVVRCALTNAASVSSLMLTTETMIAEAPKKDAPAPMGDHGGMGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttagtattttcagaagaagctcgtgcacacattctaaaaggtgtgaacactctagct
aatgcagtaaaagtaactttaggacctaaaggtcgcaacgttgtcatcgataaatctttt
ggttcacctttaatcactaaagacggcgtgacagttgctaaagaaatcgaattggaaaat
aaattcgaaaacatgggcgcgcaaatggttaaagaagttgcgtctaaaacaaacgatgaa
gctggtgacggtacaacaactgcgacggtgcttgctcaagctatctaccgtgaaggtgcg
aagcttgtcactgcgggccacaatccaatggctatcaaacgtggtatcgacaaagctgta
acgattgttattgatgagctcaaaaaaatggcgaagccagttaagggttcaaacgaagtt
gcacaagttggatctatctctgcaaacaacgataaagaaatcggaactatgcttgcagat
gcaatggataaagtaggccgcgaaggcgtaatcacgatcgaagaatctaaaactgcaaaa
actgaagttacagtagtagaaggtatgcaatttgaccgtggctacctttctccatacttc
gtaacaaatgcagagagaatggaagctgttcttgagaacgcatatgttcttgtttacgac
aaaaaaatctcttcaatgaaagacatgatcaacatccttgaaggcgttgcaaaacaaggc
cgtcaattgttaatcatcgctgaagatgttgaaggtgaagcattagcgactcttgttgtg
aataagcttcgtggaactcttcacatctgtgcagttaaagctcctggtttcggcgatcgt
cgtaaatcaatgcttgaggatatcgctatccttactggcgcaaaagttatctctgaagac
atgggtcgtaaacttgagcaagcaactatcgaagatcttggtgttgctaagcgcgtagtt
gttgataaagacaatacaacagttattgatggtgctggtaaaaaagcagacatctctgct
cgcgtagcttctatcaaagctcaaatcgaagaaacttcatctgattatgataaagagaag
cttaaagagcgcctagctaaattagctggtggtgttgctgttattcacgtaggtgctcct
tcagaagttgaaatgaaagagaaaaaacaccgcgtagaagatgctttgaatgcaactcgc
gcagctgttgaagaaggtatcgtagcaggtggtggtacatcacttctaagagcttctatg
gctattgaaaaatctcaattcggtgaagaagagcaatttggtgcgatgattattaaacgc
gcttgtgaagagccaattcgtcaaatctctgccaacgctggtcttgatggtgctatcgtt
cttgatcgtattcttcaaaacaagtctgtttcatggggtttcaatgcttactctgatgaa
tacactgacttaatcaaagacggtgttattgatccagttaaagttgttcgttgtgctctt
acgaatgccgcgtctgtatcttcattgatgcttacaactgagactatgattgctgaagct
cctaaaaaagatgctcctgctccaatgggtgaccatggtggcatgggtatgggtggtatg
ggcggaatgatgtaa
DBGET
integrated database retrieval system
