Bdellovibrio bacteriovorus W: BDW_04415
Help
Entry
BDW_04415 CDS
T03036
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bbw
Bdellovibrio bacteriovorus W
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbw01011
]
BDW_04415
Enzymes [BR:
bbw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BDW_04415
Peptidoglycan biosynthesis and degradation proteins [BR:
bbw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BDW_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
TPR_2
Iml2-TPR_39
TPR_12
TPR_8
TPR_1
SLT_4
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
AHI05391
LinkDB
All DBs
Position
complement(923328..925490)
Genome browser
AA seq
720 aa
AA seq
DB search
MPRSIVALSFLSVMLGCSTLSRLDTKIDRKLTPPASTFLTRYKNATTQELSNLAVGANEQ
NIRWWKNYTLASKLRTTDATQSCSLYKDLSNEEEFPLNDLSLLRAYEICSDEKGLKQLPS
AIAPWYNDLFVEIQLKEALESEDLNDDVEAFVLKARKETNKKIKEEYYLKALMTAQKLNS
QEKIAEVQAALYKNSPRLDPQPALKDLSAVAMDYRFHRDFDSAVAAYEKILKAKGSNDND
KFQALRSLRQTYKVAQRKTEYIKATDDLVEWTAKNFRKNKKDRRATARYHDALMLNAKAL
WTESQVTKAVQNLQRALKDLKGFYPLDEVYFILGRIEEEKGRFEEAITHFELSYNQPVSM
TGLRDKIAWLKSWNYYKLEKWNEAKDSFTEMRDSVKDPSDKARARFWLSRTYQKLNLPQD
ATQELEVLKTEDPMGYYGVLAIRELKQNYPPLRDEAQDLEKLSLLGVSEIPAQNRLVAEW
LIAVKEKAFAEQIISKMAESLRQNKVTSEETWLAMSSGFARSGLYLPLFAAIGALQPEVK
DKLLKDHPDLLFPLAFKDIVADASQKSGTPSEFILSIIRQESAFNPEARSPADAFGLMQL
LPSVAKQLAKENKLEYAEASDLFIPEINVPLGAFELKNLMKRYNNQFILAVSGYNANHNA
IRGWLKTRYREDSVEFIEEVPYEETRAYIKLVMRNYVFYKRLRTQESIQFPEDLLKLSPL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcctagatccatcgtcgcactttcatttttatcagttatgctcggatgctcgactcta
tcgaggcttgataccaaaattgatagaaaactcactccccccgcttctacttttttaact
cgatacaagaatgccacgacacaagagctttcaaaccttgccgtgggagctaatgagcaa
aacattcgctggtggaagaactacactctagcaagcaagctgcgcacgacggatgccact
caatcctgctcgctctataaagatctctctaacgaggaagaattccctctgaatgatttg
tctttattaagagcctatgagatttgtagcgacgaaaagggtcttaaacaattaccaagt
gcgattgccccttggtacaatgatctctttgtggaaatccaactcaaagaagccctggag
tctgaagatcttaatgacgacgtcgaagcctttgtattaaaggcgcgcaaagagaccaat
aaaaaaatcaaagaagagtattatcttaaggctctgatgacagcgcaaaagttgaactcc
caagaaaagatcgcggaagttcaagcggccctttacaaaaactcaccgcgcctagatccc
cagcccgcactaaaagatcttagcgctgtggctatggactaccgctttcatcgtgacttt
gacagtgctgttgctgcctacgagaaaattctgaaagccaaaggcagtaatgacaatgat
aagtttcaagccttgcgcagccttcgccagacttacaaggtggcacaaagaaaaactgaa
tacatcaaagcgaccgatgatcttgttgagtggacagccaagaattttcgcaaaaacaaa
aaagatcgtcgcgcaacagctcgttaccacgatgcgctgatgttgaatgcaaaagctcta
tggactgagagccaagtcaccaaagctgtgcagaacctacaaagagcccttaaagattta
aaaggcttctaccctctagatgaggtttacttcatccttggcagaattgaagaagaaaaa
ggacgttttgaagaggcgatcactcactttgagcttagctataaccaaccggtgagcatg
acgggattgcgtgataaaatcgcgtggctaaaatcttggaactactacaaacttgaaaag
tggaacgaagctaaagatagtttcactgagatgcgcgactctgtgaaggacccttccgac
aaagctcgcgctagattctggttgtcgcgtacttatcagaagctcaaccttccacaggat
gccactcaagaactcgaagttttaaaaaccgaagaccctatgggttattacggcgtctta
gccattcgcgagctcaagcagaactaccctcctttaagagatgaagctcaagatcttgaa
aaattaagccttttaggtgtctctgagatccctgcgcagaatcgacttgtggccgagtgg
cttattgccgtgaaagaaaaagcttttgctgagcagatcatttcaaaaatggcggagtct
ctccgccaaaacaaagtcacctcagaagaaacttggctagccatgtcttcgggctttgcg
cgcagtggtctttacttaccgctctttgcagccattggcgcccttcaacctgaagtaaaa
gataaactcttaaaagaccatccagatcttttattcccgctagcatttaaagacattgtc
gcagatgcctcgcaaaaaagtgggactccgtctgagtttatcttgtcgatcattcgtcaa
gagtccgcattcaaccctgaagcgcgcagccctgctgatgcatttggtttaatgcaactt
cttccgagcgtggcaaagcaactcgcaaaagaaaacaaactcgaatacgccgaagccagt
gatttatttattcccgagatcaacgttcctctaggggcttttgaacttaagaacttgatg
aagcgctataataatcaatttattttagcagtctctggctacaacgccaatcataacgcc
attcgtggctggctcaaaactcgctatcgtgaagactcggtcgagtttatcgaagaagtt
ccttatgaagagacccgtgcctacatcaaactcgtgatgcgcaactatgttttttataaa
agacttcgcactcaagagtcgattcagtttcctgaagatcttttaaagctctctcctctt
taa
DBGET
integrated database retrieval system
