Bdellovibrio bacteriovorus W: BDW_08215
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Entry
BDW_08215 CDS
T03036
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bbw
Bdellovibrio bacteriovorus W
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbw03400
]
BDW_08215
Enzymes [BR:
bbw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BDW_08215
DNA repair and recombination proteins [BR:
bbw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BDW_08215
Prokaryotic type
BDW_08215
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHI06143
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All DBs
Position
complement(1720775..1721929)
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AA seq
384 aa
AA seq
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MDFIFQTVKSLKQDIENAGGELRVLIGDPTLEVPQLAEEIGASAVYANNDYEPAAKLRDQ
KVSSILEKKSILFKAFKDHVLFEENEVVKDDGKPYVVFTAYKNKVLQRLKDPFYTKSYPT
LKYLKGLVRTQVSSALPTLRDLGFLDTGFVFPKKSINKNTLLNYQKDRDFPALENGTSHL
GLHLRFGTVSVRELAILGLRYSDVWLSELIWRDFFAQILFHFPYVEKSCFKPEYDQIRWR
DSKHDLKAWQEGQTGYPLVDAGMRELNATGYMHNRVRMVTASFLCKHLLIDWREGEKYFA
EKLLDYDLSSNNGNWQWVAGCGVDAAPYFRVFNPVAQAEKFDPENIYIKKWIPEFGTNSY
AKPIVDHAEARHRCLRAYAIALQK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtggattttatttttcaaactgtaaagtcattgaaacaggacattgaaaatgcaggcggt
gaattgcgggttttgattggagaccccacgcttgaggttcctcagctagcggaagagatt
ggagctagtgcggtttatgccaataatgactacgaacctgctgctaagttgcgagatcag
aaggtgtcatctattttagaaaaaaagagtatactctttaaagcatttaaagatcatgtt
ctttttgaagaaaatgaagtcgtaaaagatgatggaaaaccttatgtcgtatttaccgct
tataagaataaagttttgcagaggcttaaagacccgttttatactaaatcctatcctacg
ttaaaatacttaaagggattagtgcgtacccaagttagctctgcccttccgacattgaga
gatcttggatttctcgatacagggtttgtatttcccaaaaaatctatcaataaaaacacg
ttgcttaactatcaaaaggatcgtgattttccggcacttgaaaatggaacaagtcacttg
ggacttcacttgcgatttggaacagtgagtgtgcgcgagctggctattttgggtttgcgg
tattctgatgtttggctgagtgaattgatctggcgcgatttctttgcgcagatcctcttt
cactttccctatgtcgaaaagtcctgctttaagccagagtatgatcaaattcggtggcgc
gattcaaagcatgatttaaaagcgtggcaagaaggacaaacgggttatccactagtcgat
gccggaatgcgggaattgaatgccacgggctatatgcacaatcgagtgcgtatggtgaca
gctagctttctatgtaagcatttactgattgattggcgcgaaggtgaaaaatactttgcg
gaaaagctcttggattatgacttgtcatctaacaatggcaattggcagtgggtagcaggt
tgtggggtcgatgcggctccttattttagagtttttaatcccgtggcccaagctgaaaag
tttgatcctgaaaatatctatataaaaaaatggatacccgagtttggaacaaacagttac
gctaaacccattgtggatcacgcggaagcccgtcatcgttgtttacgagcttatgccatc
gctttacaaaaatag
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