Bdellovibrio bacteriovorus W: BDW_08595
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Entry
BDW_08595 CDS
T03036
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bbw
Bdellovibrio bacteriovorus W
Pathway
bbw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BDW_08595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbw03400
]
BDW_08595
DNA repair and recombination proteins [BR:
bbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BDW_08595
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BDW_08595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
AAA_30
HH_RND_rel
AAA_22
UB2H
Microtub_bd
NBAS_11th
DUF8810
DUF1816
Motif
Other DBs
NCBI-ProteinID:
AHI06219
LinkDB
All DBs
Position
complement(1798009..1800087)
Genome browser
AA seq
692 aa
AA seq
DB search
MASPYKKNFTLVSDFKPAGDQPEAIKNILENFKAGLKYQTLLGVTGSGKTFTMAHTIAQL
NQPALILAPNKTLAAQIYAEMKELFPQNAVEYFVSYYDYYQPEAYIPSTDTYIEKDSAIN
EQIDRMRHSATRSLFDRRDVIIVSSVSCIYGLGSPEAYEGMMIQVMSNTSMKRDHLLREL
IRIQYQRNNVDFSRGTVRVRGDNVEVFPPYEEDRAIRIEFFGDFIERLSWVDPLTGQVLE
ELDQIGIYPGSHHVTSEDNLQKAIRTIQDELREQLVQLKQEMKPLEAQRLEQRTYYDIEM
MEQMGFCQGIENYSRHMTGRGPGEPPPTLLEYFPQEFVTFIDESHVTVPQLGGMYRGDRA
RKQTLVEHGFRLPSALDNRPLNFQEFEKMVDKVVYVSATPGNYELERSEGVIVEQIIRPT
GLIDPQVEVRPVRHQVDDLLKEIRDRVKKQERVLITTLTKRSAEDLTEYYENLGVKVKYL
HSEVKTVERTEILRDLRLGVFDVLVGINLLREGLDIPEVSLVGITDADKEGFLRSERSLI
QTIGRAARNVNGRVILYGDTVTESMAKAMRETDRRRAIQEEYNRQHGITPQTVRKRIKEG
LGEVFDGTLQATILAGENKAQAAYHKFSNKPDQIQVEIEKLRAKMKEYSANLEFEEAAKI
RDEIKRLQITELSIRSGEVETESAEVLKDGLK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccctataaaaagaactttacccttgtctctgactttaagcctgcgggtgat
cagccagaggcgattaaaaacatccttgaaaacttcaaagccggtttgaagtatcaaact
ctcctcggagtgacgggttcagggaagacattcacaatggcgcacacaatcgcacaatta
aatcagcccgctctgattttggcgccaaataaaactctggcagcgcagatctacgcagag
atgaaagaactctttccgcaaaatgccgtagaatattttgtgagctattacgattactac
cagccagaggcttacatcccatctacagatacctatatcgaaaaagactctgcgatcaat
gagcagattgatcggatgcgccactcagcgacgcgatctttgtttgatcgtcgcgatgtg
attattgtgagctcggtttcctgtatctacggtctaggttcaccagaggcctatgaaggc
atgatgattcaggtaatgtcgaatacttcaatgaagcgcgatcatctcttgcgtgagttg
attcgcattcagtatcagcgtaacaatgtggatttttcgcgggggacggtgcgcgttcgt
ggtgataatgtggaagtttttcctccttacgaagaggatcgcgcgattcgcatcgagttc
tttggcgactttatcgaaagactttcttgggtggaccctctgacgggccaagttttagaa
gagctggatcagattggtatctatccaggaagccatcacgtcacaagtgaagacaacctg
caaaaagcgattcgtacgattcaagatgaattgcgtgaacagttggttcagttaaagcaa
gagatgaaaccccttgaggcgcaaagacttgaacaaagaacttattatgacatcgagatg
atggagcagatgggtttttgtcaggggattgaaaactattcccgccatatgacgggtaga
ggtcccggcgagccacctccaacgctattggagtactttcctcaagagttcgtaactttt
attgatgagtcccacgtgaccgttccgcagctgggtggaatgtatcgtggcgaccgagct
cgtaagcaaacattggtggagcatggatttagactgccttcggcactagacaatagacct
cttaactttcaagagtttgaaaaaatggtggataaggttgtctatgtctctgccactcca
ggaaattatgaacttgaaagatctgaaggggtgattgtcgagcagatcattcgtccgaca
ggtttgattgaccctcaagtcgaggtgcgccccgtgcgccatcaggtcgacgatctttta
aaggaaattcgcgaccgagtgaagaagcaagagcgggttttaatcacaacgcttacgaag
cgctccgccgaagatctcacggagtattatgaaaatctgggcgtgaaggtgaagtacctt
catagcgaggtgaaaacagttgaacgaactgagattctaagagacttgcgattaggagtt
tttgacgttcttgtggggatcaatcttttacgagaagggttagatattccagaggtaagt
cttgttgggataacggatgctgataaagagggattcctaagatcagagagatctttgatt
caaaccattggacgagctgcgagaaacgtcaacgggcgtgtgattttgtatggagatacg
gtgactgagagcatggcaaaagctatgcgagaaacagatcgtcgccgagccattcaagaa
gagtacaaccgtcagcatggaatcactcctcagactgtgcgtaagcgtattaaagaaggt
ttgggtgaggtctttgatggcaccctgcaggcaaccattctggcgggagagaacaaggct
caggctgcttatcataaattttcgaacaagcctgatcagattcaggtcgagattgagaag
ttacgtgctaagatgaaagagtactctgccaatcttgaatttgaagaggctgctaagatt
cgcgatgaaatcaagcgactgcaaatcaccgaactttcgattcgcagtggtgaagtggag
acagaaagtgcggaggtcctaaaggatggcctcaagtag
DBGET
integrated database retrieval system
