Bdellovibrio bacteriovorus W: BDW_09615
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Entry
BDW_09615 CDS
T03036
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
bbw
Bdellovibrio bacteriovorus W
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbw03400
]
BDW_09615
DNA repair and recombination proteins [BR:
bbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BDW_09615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
Zn_ribbon_3
Zn_ribbon_Com
AAA_30
AAA_22
DZR
Zn_Ribbon_1
ChuX_HutX
T1R_D3-like
Zot
AAA_16
Zf_1st_IFT121
Motif
Other DBs
NCBI-ProteinID:
AHI06423
LinkDB
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Position
complement(2029831..2031555)
Genome browser
AA seq
574 aa
AA seq
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MYQLRPYQQEAVKATLNHFRREKAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHGKYKSFGLEAGIFSAGLQRKDFEQKVIFGSIQSVARAEEEFFENFSLVVIDECHR
VSVTGETQYFQVIEKLKKHNSDLCILGLTATPYRLGLGWIYNYNSHLKIQQTTEERFFKK
CIYDLSIKYMIKNGYLTRPVKIDSPVACYDFSSLKIHGMSYLQSQVEEILKDQKRITPLI
IKNIIEMSKDRHGVMIFTSSVNHAIEIMQCLPPYVAALVVGDTDNKDRDEIIEAFKARKL
KFLVNVSVLTTGFDAPHVDVIAILRPTESISLYQQIIGRGLRLSPKKEDCLILDYTGQNH
DLYSPEIDDDKPSNQSVIVEVPCPSCGSINHFWGLKDSDGEVTEHFGRRCKGAFEDPVTN
EIEPCGFRFRFKLCDRCGEENDISARSCTACDHLLVDTDKKLKEAMSLKDAHVLRVDSMT
YQKGFDKRGNERLEVRYYDVEANFLTEYFYLNSSESVQAFYYNFIRMHTKRPEVKIFIKD
VDDLLNRQHLFRSPLFVVARKQKQFWSIREKVFE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaactgcgcccctatcaacaagaagccgtcaaagcgactttaaatcatttccgt
agggaaaaggcaccggctgttattgttttaccgacaggggccgggaagagcttagtgatc
gcagagcttgcaaggcttgctcgcgggcgggttttagtccttgcccatgtcaaagaactg
gtggagcaaaaccacgggaaatataaaagctttgggcttgaggccgggatattttcagcg
ggtttgcagcgcaaagattttgaacaaaaggtcatttttggcagtatccagtccgtggcc
agagccgaagaagagtttttcgagaatttttccctagttgttatcgacgagtgccatcgg
gtttctgtcacgggcgaaacacaatactttcaagtcattgaaaagttaaaaaaacataat
tcggatctttgtatcttgggactcacggcgactccttatcgcttaggcttaggttggatc
tataattataattctcacttaaaaattcagcagactacggaagagcgcttctttaaaaaa
tgtatttatgatttgagtatcaagtacatgattaaaaatggttacctgacgaggcctgtg
aaaattgactcacccgtggcctgctatgatttctccagtttgaaaattcatgggatgagt
tatttgcagtcacaagtcgaagaaattcttaaagatcaaaaaagaatcacgcccttaatt
atcaaaaacattattgaaatgtcgaaagaccgtcatggcgtcatgatttttacaagctcg
gtgaatcacgctattgaaatcatgcagtgtttgccaccttatgtagcagccttggtggta
ggggatactgacaataaagatcgcgatgaaatcattgaggccttcaaggcgcgtaaacta
aaattcttggtcaatgtgtctgtgctcacgacgggctttgatgcgcctcatgtcgatgtg
attgcgatcttgcggcctactgaatctataagtctttatcagcaaattattggcagaggc
ttgcggctgagtcccaaaaaagaagattgtctgattcttgattacacaggccaaaatcat
gatttgtactcaccggaaattgatgatgacaaaccctcgaatcaatctgtcatcgttgaa
gtaccgtgtccttcctgcgggtctatcaatcatttctggggactcaaagatagtgacgga
gaagtgactgagcatttcggtagacgctgtaaaggggccttcgaagatccagtcaccaat
gaaattgagccctgtggttttagatttcgctttaagctctgtgatcgctgtggggaagaa
aacgatatctcagcgcgcagttgcactgcctgtgatcatctcttagtagatacagataag
aaactcaaagaggctatgagtctcaaagatgcccatgttttgcgtgtggactcgatgact
tatcaaaaaggttttgataagcgcggcaatgagagactcgaagtgcgctactatgatgtg
gaagccaattttttgacagagtatttctatctaaactcttctgaaagtgtgcaggctttt
tattataactttatccgcatgcacaccaaaagacctgaggtgaagatcttcatcaaagat
gtggatgatctacttaatcggcagcatcttttccgaagcccgttgtttgtggtcgcaaga
aaacagaagcagttctggagtattcgcgagaaggtttttgagtaa
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