Bdellovibrio bacteriovorus W: BDW_12955
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Entry
BDW_12955 CDS
T03036
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbw
Bdellovibrio bacteriovorus W
Pathway
bbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BDW_12955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbw03400
]
BDW_12955
Enzymes [BR:
bbw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BDW_12955
DNA repair and recombination proteins [BR:
bbw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BDW_12955
Prokaryotic type
BDW_12955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
IFT43
Motif
Other DBs
NCBI-ProteinID:
AHI07091
LinkDB
All DBs
Position
complement(2728947..2729627)
Genome browser
AA seq
226 aa
AA seq
DB search
MRPEKYLNSDWKKKLDAEFNSQYYQDLSRRLSQRQEAGAVIFPPENEIFQALNRTPFDNV
KVVIVGQDPYHGNGQAEGLSFSVKAGVRFPPSLRNILKELHADTGEEIPLSGSLMKWAEQ
GVLLLNAVLTVEEAQANSHQGWGWEQLTDRIIDLINEEKNHVVFLLWGSYAQRKGRRIDR
QKHLVIEEVHPSPLSAHRGFAGSQPFSKINSYLRENGQSEISWKLT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagacctgaaaaatacttgaattctgactggaaaaagaagctcgatgctgagtttaat
tcgcaatattatcaagaccttagtcgaagactctcgcagcgacaagaggctggagccgtc
attttccctccggaaaatgagatctttcaggcgctgaatcgcactccgtttgacaatgtg
aaagtggtgattgtcgggcaagatccctatcacggtaatgggcaagcagagggcttaagc
ttctctgtcaaagccggtgtgcgctttccaccttctttgagaaatatcctcaaagagctc
catgcagacacgggggaggagattcctctttcaggttctttgatgaagtgggccgagcaa
ggggtattgcttttaaacgctgttctgacggtggaagaggctcaggcaaactcgcatcag
ggatggggctgggagcagctcaccgatcgtattattgatttaattaatgaagagaagaat
cacgtcgtctttctgttgtggggctcttatgcgcaaaggaaggggcgtcgcattgatcgc
cagaaacatctcgtgattgaagaagtgcatccttcgcctttatcggctcatcgcgggttt
gcgggttctcagccattttcaaaaattaattcttatcttcgcgaaaatggacagtcagag
atttcttggaagctgacttaa
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