Bordetella bronchiseptica S798: BBS798_0870
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Entry
BBS798_0870 CDS
T03637
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bbx
Bordetella bronchiseptica S798
Pathway
bbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBS798_0870 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbx03400
]
BBS798_0870 (mutM)
Enzymes [BR:
bbx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BBS798_0870 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BBS798_0870 (mutM)
DNA repair and recombination proteins [BR:
bbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBS798_0870 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
C1_2
DUF7573
RNHCP
Motif
Other DBs
NCBI-ProteinID:
BAO67596
LinkDB
All DBs
Position
complement(940738..941565)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL
LLRFDHGVQIVHLGMSGSLRRVPEQEAPRKHDHVDWVFDHAVLRLHDPRRFGAVLWHPDE
AGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDAVVGVGNIYASESL
FRAGIDPRTAAQRVSAARCDRLAAAIRATLSDALDSGGSTLRDYVGASGEPGAYFAIHAA
VYERAGLPCRVCGTPIRRLVQGQRATYFCPSCQKR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcctgaagtcgagaccacccgacggggaatcgacaccgtcataacgggc
cggacgctacgccgcctggtcgtgcgcgaagcgcgcatgcgctggcccattccacccgcc
ctgcccgatctgctggccggccgcaccgtgctcgaatgcgggcggcgcggcaaatacctg
ctgctgcgcttcgaccatggcgtgcagatcgtgcatctgggcatgtccggatcgctgcgc
cgggtgcccgagcaggaggcgccgcgcaagcacgatcacgtcgactgggtattcgaccac
gccgtcctgcggctgcacgatccgcgccgcttcggcgcggtgctgtggcaccccgacgag
gccggcccgatcgccgcccacccgctgctggcccgcctgggcatcgaaccgttcgacccg
cgctttgacggccgctggctgcacgcctacttccgcggacgccgggtcgccatcaagcag
gccctgctggccggcgacgccgtggtgggcgtgggcaacatctacgcatcggaaagcctg
tttcgcgccggcatcgatccgcgcacggccgcccagcgcgtctcggcggcgcgctgcgac
cggctggcggccgccatccgcgccaccctgtcggacgcgctggattccggcggcagcacg
ctgcgcgactacgtcggcgccagcggcgagccgggcgcgtatttcgccatccacgccgcc
gtctacgagcgcgccggcctgccctgccgcgtgtgcggcacgccgatccgccgcctggtg
cagggccagcgcgccacgtatttctgtccgagctgccagaaacgctag
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