Bordetella bronchiseptica S798: BBS798_2227
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Entry
BBS798_2227 CDS
T03637
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bbx
Bordetella bronchiseptica S798
Brite
KEGG Orthology (KO) [BR:
bbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbx03000
]
BBS798_2227
Transcription factors [BR:
bbx03000
]
Prokaryotic type
Helix-turn-helix
Other families
BBS798_2227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
AAA_lid_14
Sigma54_activ_2
HTH_30
AAA_5
PAS_8
HTH_29
PAS
HTH_28
HTH_23
nSTAND3
HTH_1
PAS_4
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BAO68952
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Position
complement(2442781..2444649)
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AA seq
622 aa
AA seq
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MPGYQLSASGQHLPSTQAAAPIVRSWERCASATADLHDDPVALRHGDLQERLEQHACVLR
AAQPEIETLAGMVASASSLVLLADASGVILQASGNTGFLQRADHVALRPGVSWAENHRGT
NAIGTALIEAAALRVHGAEHFLRRNQILSCHAAPIRSPRGDILGVLDISGDAGRMHAYAL
SLASMCARQVANRVIEQAGERCLYLVFHKQASLLDSVERGLLLIEDERIVGANDAAVALL
GATWPALLDQPLDGWLVDWRAVARTPGRVHTPQGAPFHAVLRQGGHARSLPAPPRPPRAV
PAQAPEETLPALAPALQAGFERARRALDGGLSVLLQGETGAGKEVYAQHLYRRSIWRDGP
FVAVNCGALPESLIEAELFGYEPGAYTGARRLGARGRLREADGGVLFLDEIGDMPLALQT
RLLRALQERMVQPLGADKAVPVNFGLVSATHRDLDAMIAAGEFRADLYYRLHDYAVPLPR
LRERDDLRPFICAALRALDDTPAGLTLADDALDALAAYAWPGNYRQLRSVLRTLALFHPP
GSLIHRHHLPAAIAAPAVHAADGAAPRPGVAAPPAAPATLRDASLHRIDQALARHGGNIA
GAAHELGIHRSTLYRHLARQRG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctaccagctttccgcatccggccagcacctgccgtccacgcaggccgccgct
cccatcgtgcgctcctgggagcgctgcgccagcgccaccgccgacctgcacgacgacccc
gtcgccctgcgtcacggcgacctgcaggaacgcctcgagcagcacgcctgcgtgctgcgc
gccgcccagcccgaaatcgaaaccctggccggcatggtggccagcgcctccagcctggtg
ctgctggccgacgccagcggcgtgatcctgcaggcaagcggcaataccggtttcctgcag
cgcgccgaccacgtggcgttgcggcccggggtcagctgggccgaaaaccatcgcggcacc
aacgccatcggcacggcgctgatcgaagccgccgcgctgcgcgtgcacggcgccgaacac
ttcctgcggcgcaaccagatcctcagttgccacgcggcgccgatccgttcgccgcgcggc
gacatcctcggcgtgctggatatctcgggcgacgccgggcgcatgcacgcctatgcgctg
agcctggccagcatgtgcgcgcgccaggttgccaaccgcgtcatcgaacaggccggcgag
cgctgcctgtacctggtcttccacaagcaggcctcgctgctcgattcggtcgaacgcggg
ctgctgctgatcgaggacgaacgcatcgtcggcgccaacgatgccgccgtcgcgctgctg
ggcgccacctggcccgcgctgctggaccagccgctggacggctggctggtcgattggcgc
gccgtcgcgcgcacgcccggccgcgtccatacgccacaaggcgctcccttccatgccgtg
ctgcgccagggcgggcatgcgcgctcgctgcccgcgcccccacgcccgccgcgcgccgtg
ccggcgcaggcgcccgaggaaacgctgccggcgctggcgccggcgctgcaggccggcttc
gaacgcgcccggcgcgcgctcgacggcggcctgtcggtgctgctgcaaggtgaaaccggc
gccggcaaggaagtctacgcacagcacctgtaccgccgcagcatctggcgcgacggtccg
ttcgtcgcggtcaattgcggcgccctgcccgaaagcctgatcgaggccgaactgttcggc
tacgagccgggcgcctataccggcgcgcggcggctgggcgcgcgcggccggctgcgcgaa
gccgacggcggcgtgctgttcctggacgaaatcggcgacatgccgctggccctgcagacc
cgcctgctgcgcgccctgcaggagcgcatggtgcagccgctgggcgccgacaaggcggtg
ccggtcaacttcggcctggtcagcgccacccaccgcgacctggacgccatgatcgccgcc
ggcgagttccgcgccgacctctattaccgcctgcacgactatgcggtccccttgccgcgg
ctgcgcgagcgcgacgacctgcgcccctttatctgcgccgccttgcgcgcgctggacgac
acgcccgccggcctgacgctggccgacgacgccctcgacgcgctggccgcctatgcgtgg
ccgggcaactaccggcagctgcgctcggtgctgcgcacgctggcgctgttccatccgccc
ggcagcctgatccatcgccaccacctgcccgccgccatcgccgcgcccgccgtccacgcg
gccgacggcgccgcgccgcgcccgggcgtggcggccccgcccgcggcgcccgccacgctg
cgcgacgccagcctgcaccggatcgaccaggccctggcccgccacggcggcaatatcgcc
ggggccgcgcacgaactcggtatccatcgcagcacgctgtaccggcacctggcgcgccag
cgcggctag
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