Bordetella bronchiseptica S798: BBS798_2844
Help
Entry
BBS798_2844 CDS
T03637
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bbx
Bordetella bronchiseptica S798
Brite
KEGG Orthology (KO) [BR:
bbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbx03009
]
BBS798_2844 (rumA)
Enzymes [BR:
bbx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BBS798_2844 (rumA)
Ribosome biogenesis [BR:
bbx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BBS798_2844 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
TRAM
RrnaAD
Methyltransf_31
Methyltransf_32
Methyltransf_23
TRM5-TYW2_MTfase
Methyltransf_11
PCMT
DOT1
Motif
Other DBs
NCBI-ProteinID:
BAO69569
LinkDB
All DBs
Position
complement(3107158..3108558)
Genome browser
AA seq
466 aa
AA seq
DB search
MVDVLNIESLDLEARGIAHRDGKVLFVEGALPGERVTVQTVRRKPSYEIAKVEEILRPSS
QRVAPRCPHFGVCGGCAMQHLAPAAQVAIKQRALEDTFWHVGKLKPARILPPLYGPTWGY
RYRARLSVRVVPKKGGVLVGFHERKSSYVADMRECHVLPPAVSRLLLPLRAMIAAMSAPD
RMPQIEVALGDEAIVLVLRHLLPLTDGDIAVLRAFAAEHGVQWWLQSKGPDTVHPLEREH
ADALAYTLPEFGLRMPYRPTDFTQVNHAINRAMVSRALKLLDVQPQDRVADLFCGLGNFT
LPLATQGREAVGVEGSKALTDRAHEAAARHGLGERTRFATLNLFEVDVQWLRGLGYFDRM
LIDPPREGAQAVAQALSLLAPGERPRRIVYVSCNPGTLARDAAIMVHEGGYALRSAGVIN
MFPHTGHVESIAVFESLDEATVLQAQAQARQKAREEAERLAEAAAA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgttttgaatattgagtccctggacctcgaggcccgggggatagcccaccgt
gacggcaaagtgctgttcgtggaaggcgccttgcccggcgagcgggtcacggtgcagacg
gtgcgccgcaagccgtcctacgagattgccaaggtcgaggagatcctgcgcccgtcctcg
cagcgcgtggcgccgcgctgcccgcatttcggcgtttgcggcggctgtgccatgcagcac
ctggcgcccgcggcccaggtcgccatcaagcagcgcgcgctcgaagacactttctggcac
gtgggcaagctcaagccggcgcgcatcctgccgccgctctatggcccgacctggggctac
cgctatcgcgcccgcctgtcggtgcgcgtcgtgcccaagaagggcggggtgctggtgggc
tttcatgaacgcaagagcagctacgtggccgacatgcgcgaatgccatgtgctgccgccg
gcggtcagccgcctgctgctgcccctgcgcgccatgatagcggccatgtcggcgccggac
cgcatgccccagatcgaggtcgcgctgggcgatgaggcgatcgtgctggtgttgcgccac
ctgttgccgctgaccgacggcgatatcgccgtgctgcgcgcgtttgccgccgagcacggg
gtgcagtggtggctgcagtccaagggcccggataccgtgcatccgctggagcgcgagcat
gccgacgcgctggcctataccctgccggagttcgggctgcgcatgccttaccggccgacg
gatttcacccaggtcaaccacgccatcaaccgcgccatggtgtcgcgcgccctgaagctg
ctggatgtgcagccgcaggaccgcgtggcggacctgttctgcggcctgggcaatttcacg
ttgccgctggccacccaggggcgcgaggcggtgggggtggagggcagcaaggcgctgacc
gaccgcgcgcacgaggcggcggcgcgtcatgggctgggcgagcgcacccgtttcgccacg
ctcaacctgttcgaggtcgatgtgcaatggctgcgcgggctgggctacttcgaccgcatg
ctgatcgacccgccgcgggaaggcgcgcaggctgtcgcgcaggcgctgtcgctgctggcc
cccggcgagcggccgcgccgcatcgtgtacgtctcctgtaatccgggcaccctggcgcgc
gacgccgccatcatggtgcacgaaggcggctatgcgctgcgcagcgctggcgtcatcaac
atgttcccgcataccggccatgtcgaatcgatcgcagtgttcgagtcgctcgacgaggcg
acggtgctgcaagcgcaggcacaggcgcggcagaaggcgcgcgaggaggccgagcgcctt
gccgaggcggccgctgcctga
DBGET
integrated database retrieval system
