Bordetella bronchiseptica S798: BBS798_3071
Help
Entry
BBS798_3071 CDS
T03637
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bbx
Bordetella bronchiseptica S798
Pathway
bbx03030
DNA replication
bbx03410
Base excision repair
bbx03420
Nucleotide excision repair
bbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBS798_3071 (polA)
03410 Base excision repair
BBS798_3071 (polA)
03420 Nucleotide excision repair
BBS798_3071 (polA)
03440 Homologous recombination
BBS798_3071 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbx03032
]
BBS798_3071 (polA)
03400 DNA repair and recombination proteins [BR:
bbx03400
]
BBS798_3071 (polA)
Enzymes [BR:
bbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBS798_3071 (polA)
DNA replication proteins [BR:
bbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBS798_3071 (polA)
DNA repair and recombination proteins [BR:
bbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBS798_3071 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBS798_3071 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WD40_4
Motif
Other DBs
NCBI-ProteinID:
BAO69796
LinkDB
All DBs
Position
complement(3354175..3356889)
Genome browser
AA seq
904 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVQDHKAEYAVCVFDA
RGKTFRDDLFPDYKSHRPPMPEDLAAQIEPIHEAVRALGWPLLAIEGVEADDIIGTLARQ
ASAQGIDTIVSTGDKDLAQLVDPHVTLVNTMSGEVLDVAGVNDKFGVPPERIVDYLMLVG
DTVDNVPGVNKVGPKTAVKWLAEHGSIDALVAAADSVKGVAGNNLREAIPNFPLTRTLLT
VKCDCDLAGHVSDWEDLAWRERDAATLTALFDRYGFRTWLRELTGDQERLPTGDARAVPQ
AVAPAELDYRIITDWAAFDAWMALVEDAPLVALDTETTSLDEMQARLVGLSMAVKPGVAC
YIPVAHRGPEAGDQLPRDEVIARLRGWLEDAGRAKLLHHAKYDTHVFANEGVSLAGVAED
TMLQAYVLESHRGVGLNDLAQRFLGRSGVNYEDLCGKGAKQIGFDEVAVALAGHYSCEDS
DFTLQLHEVLRPRVAEDEGLERTYLLELQVSRVLTVVERNGVKVDAQELGRQSHKLGQEM
LALEQRAYELAGQPFNLNSPKQLGEILFGRMGLPVVRKTAGGAPSTDEEVLSKLAQDYPL
PQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYSQAAVITGRLASSDPNLQNIPVRT
EAGRRVREAFIAEQGKLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATASEVFGV
PLAEVGAEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFTRYPGVARYMDD
TRRLARDQGYVETVFGRRLQLPDIRAASGPRRQGAERAAINAPMQGTAADLIKMAMVAVQ
DWLDAERLRTRMIMQVHDELVLEVPDEELAAVAEALPRLMCDVATLRVPLVAEVGMGTNW
EQAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattgctggtagacggttcgagctacttgtaccgtgctttccacgcc
atgcccgacctgcgcaatgcgcagggcgaacccacgggtgcgctttatggcgtggtcaat
atgttgcgcaagctcgttcaggatcataaggcagagtatgccgtatgcgttttcgatgca
cgcggaaaaacattccgggacgatttgttccctgactacaagtcgcaccgcccgcccatg
cccgaagacctggcggcgcagatcgagccgatccacgaggccgtacgcgccctgggctgg
ccgctgctggccatcgaaggggtggaggcggacgacatcatcggcacgctggcgcggcag
gccagcgcgcaaggcatcgacaccatcgtctccacgggcgacaaggacctggcgcaactg
gtcgacccgcacgtcacgctggtcaacaccatgagcggcgaggtgctcgacgttgccggg
gtgaacgacaagttcggcgtgccgccggagcgcatcgtcgattacctgatgctggtcggc
gacacggtcgacaatgtgcccggcgtgaacaaggtcggacccaagacggccgtcaagtgg
ctggccgaacatggctccatcgacgcgctggtggccgccgccgacagcgtcaagggcgtg
gccggcaacaatctgcgcgaagccattccgaactttccgctcacgcgcacgctgctgacg
gtcaagtgcgactgcgacctggccggccatgtgtcggattgggaagacctggcatggcgc
gagcgcgacgcggccacattgaccgcgctgttcgaccgctacggttttcgcacctggctg
cgcgaactgacgggcgaccaggagcgcctgcccacgggggacgcgcgcgccgtgccgcag
gccgtcgcgccggccgagctggactaccgcatcatcaccgactgggccgccttcgatgcc
tggatggcgctggtggaggacgcgccgctggtggcgctggatacggaaaccacgtcgctc
gacgagatgcaggcgcggctggtgggcctgtcgatggcggtcaagccgggcgtggcctgc
tacatcccggtggcgcaccgtggccccgaggcgggcgatcaattgcccagggacgaggtc
atcgcgcgcctgcgcggctggctggaggacgccgggcgcgccaagctgctgcaccatgcc
aaatacgatacccatgtcttcgccaacgaaggagtgagcctggcgggcgtggccgaggac
acgatgctgcaggcctatgtgctggagtcgcatcgcggcgtgggcctgaacgacctggcc
cagcggtttctcgggcgcagcggcgtgaactacgaagacctgtgcggcaagggcgccaag
cagatcggtttcgacgaggtggcggtcgccctggcggggcattattcctgcgaggattcc
gatttcacgctgcagttgcacgaggtgctgcgcccgcgcgtggccgaggacgaagggctg
gagcgcacctacctgctggagctgcaggtctcgcgcgtgctgaccgtggtcgagcgcaac
ggcgtgaaggtcgatgcccaggagctggggcgccagagccacaagctgggccaggaaatg
ctggcgctggagcagcgcgcctacgagctggccggccagccgttcaacctgaactctccc
aagcaattgggcgagatcctgttcggccgcatggggctgccggtcgtgcgcaagaccgcg
ggcggcgccccctcgaccgacgaggaagtgctgtccaagctggcgcaggactacccgctg
ccgcaggtgctgctggaataccggggcctgtccaagctgaagtccacctacaccgacaag
ctgccgcgcatgatcaacccggccaccggccgcgtgcatacgcactattcgcaggcggcg
gtgatcaccggccggctggcgtcgtcggatcccaacctgcagaacatcccggtgcgcacc
gaggccggccggcgcgtgcgcgaggccttcatcgccgagcagggcaagctgctgtcggcc
gactactcgcagatcgaactgcgcatcatggcgcacgtttcggatgacgccaacctgcag
cgtgccttcgcggcgggcgaggatatccaccgcgcgaccgcctccgaggtgttcggcgtg
ccgctggccgaggtcggcgccgagcagcgccgcgccgcgaaggcgatcaatttcggactg
atctacggcatgggcgtgttcgggctggcttccaacctgggcattacgcgcgatgccgcg
caagcctacatcgaccgctatttcacccgctatcccggcgtggcgcgctacatggacgac
acgcgccggctggcgcgcgaccagggctacgtcgagacggtattcggccgcaggctgcag
ctgccggacatccgcgccgcctccgggccgcgccgccagggcgccgagcgggccgccatc
aatgcgccgatgcagggtaccgccgccgacctgatcaagatggccatggtggcggtgcag
gactggctggacgccgagcgcctgcgcacccgcatgatcatgcaggtgcacgacgaactg
gtgctggaggtgcccgacgaggaactggcggcggtcgccgaagcgctgccgcggctgatg
tgcgacgtggccacgctgcgcgtgccgctggtggccgaggtgggcatgggcacgaactgg
gaacaggcgcactga
DBGET
integrated database retrieval system
