Bordetella bronchiseptica S798: BBS798_4125
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Entry
BBS798_4125 CDS
T03637
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bbx
Bordetella bronchiseptica S798
Pathway
bbx00260
Glycine, serine and threonine metabolism
bbx00460
Cyanoamino acid metabolism
bbx00630
Glyoxylate and dicarboxylate metabolism
bbx00670
One carbon pool by folate
bbx00680
Methane metabolism
bbx01100
Metabolic pathways
bbx01110
Biosynthesis of secondary metabolites
bbx01120
Microbial metabolism in diverse environments
bbx01200
Carbon metabolism
bbx01230
Biosynthesis of amino acids
bbx01240
Biosynthesis of cofactors
bbx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bbx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BBS798_4125 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BBS798_4125 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BBS798_4125 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BBS798_4125 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BBS798_4125 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BBS798_4125 (glyA)
Enzymes [BR:
bbx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BBS798_4125 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BAO70850
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Position
complement(4482142..4483389)
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AA seq
415 aa
AA seq
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MFNRNLTLDQVDPDVWAAIQKEDVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRLKQIFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGASVNASGKLYNFVPYGLDADEVLDYAQVERLTKEHKPKLIVAGASAYALH
IDFERMARIAHDNGALFMVDIAHYAGLVAGGAYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKAVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFQDYAQQVVKNAKVLADTLV
KRGLRIVSGRTESHVMLVDLRPKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFKEAEAELTANLIADVLDNPRDEANIAAVRARVNELTARLPVYGN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccgcaacctgaccctcgaccaggtggatcccgacgtctgggccgccatccag
aaagaagacgtacgccaggaacagcacatcgagctgatcgcgtccgagaactacgccagc
ccggccgtgatgcaggcccagggcacgcaactgaccaacaagtatgcggaaggctacccg
ggcaagcgctactacggcggctgcgagtacgtcgacgtggtcgagcagctggccatcgac
cgcctgaagcagattttcggcgccgaggccgccaacgtgcagccgaactccggctcgcag
gccaaccagggcgtgtacatggcggtgctcaagccgggcgataccgtgctgggcatgagc
ctggccgaaggcggccacctgacgcacggcgcgtcggtcaacgcctcgggcaagctgtac
aacttcgtgccctacggcctggacgccgacgaggtgctggattacgcccaggtcgagcgg
ctgaccaaggaacacaagcccaagctgatcgtggccggcgcctccgcgtacgcgctgcac
atcgacttcgagcgcatggcgcgcatcgcccacgacaacggcgcgctgttcatggtggac
atcgcccactatgccggcctggtggccggcggcgcctatcccaacccggtgccgcacgcc
gatttcgtcacctccaccacgcacaagtcgctgcgcggcccgcgcggcggcgtcatcatg
atgaaggccgagttcgagaaggccgtcaattcggccatcttcccgggcatccagggcggc
ccgctgatgcacgtcatcgcggccaaggccgtggccttcaaggaagcgctgtcgcccgag
ttccaggattacgcccagcaggtcgtcaagaacgccaaggtgctggccgatacgctggtc
aagcgcggcctgcgcatcgtgtcgggcaggaccgaaagccacgtcatgctggtggacctg
cgtcccaagggcatcaccggcaaggaagcggaagcggtgctgggccaggcccacatcacg
gtcaacaagaacgccatccccaacgacccggaaaagcccttcgtgaccagcggcatccgc
ctgggcaccccggccatgaccacccgcggcttcaaggaggccgaggccgagctgaccgcc
aacctgatcgccgacgtgctggacaatccccgcgacgaggcgaacatcgccgcggtgcgc
gcgcgggtcaatgaactgaccgcccgcctgcccgtctacggcaactga
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