Bordetella bronchiseptica S798: BBS798_4311
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Entry
BBS798_4311 CDS
T03637
Name
(GenBank) endonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bbx
Bordetella bronchiseptica S798
Pathway
bbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBS798_4311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbx03400
]
BBS798_4311
Enzymes [BR:
bbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BBS798_4311
DNA repair and recombination proteins [BR:
bbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBS798_4311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAO71036
LinkDB
All DBs
Position
4684275..4685063
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AA seq
262 aa
AA seq
DB search
MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRHPPGYTGHFHH
AEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADWKDLSVISAYLPSGSSGDERQ
QAKYRFLDQFGPWLDGLMAEHRKTGREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEER
AWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARAT
SIYKDERFSDHAPLTVDYDIAL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcgtatcacctcgctcaacctcaacggtatccgttccgccttccgcaagggcctg
cagccctggatgaccgcccacaacgccgatgtactgtgcctgcaggagatcaaggtctcg
catgacgacctgaccgacgagctgcgccacccgcctggctatacgggtcacttccaccac
gccgagaaaaagggctacagcggcgtgggcatgtacctgcgcgccggcgccgaacgcgtg
gtggccggcttcgattgcgaggagttcgacgcggaaggccgcatcctgcgcgccgactgg
aaggatctgtcggtcatcagcgcctacctgccctcgggttcgagcggcgacgagcgccag
caggccaagtaccgcttcctggaccagttcggcccatggctggacggcctgatggccgag
cacaggaagaccggacgcgaattcgtcatctgcggcgactggaacatcgcccacaaggaa
atcgacctgaagaactggaagggcaaccagaagaactcgggcttcctgcccgaggagcgc
gcctggctgaccgaggtgttcgaccggcgcggcttcgtcgacgtcttccgcaagctggac
gagcgcgccgaccagtacacctggtggagcaatcgcggccaggcctgggccaagaacgta
gggtggcgcatcgactaccagatcgccaccccgggtatcgccgaacgcgcacgcgccact
tccatctacaaggacgagcggttttccgaccacgcgccgctgacggtggactacgacatc
gccctgtaa
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integrated database retrieval system
