Bacillus bombysepticus: CY96_06590
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Entry
CY96_06590 CDS
T03597
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CY96_06590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bby03019
]
CY96_06590
03400 DNA repair and recombination proteins [BR:
bby03400
]
CY96_06590
Enzymes [BR:
bby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CY96_06590
Messenger RNA biogenesis [BR:
bby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CY96_06590
DNA repair and recombination proteins [BR:
bby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CY96_06590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Rhodanese
HEM4
Motif
Other DBs
NCBI-ProteinID:
AHX17676
UniProt:
A0A9W3PQ70
LinkDB
All DBs
Position
1267039..1268568
Genome browser
AA seq
509 aa
AA seq
DB search
MKLEEYLYKWFGYSEFRPGQKGVITDLLEGKDVIAMLPTGRGKSMCYQFPGLMREGTVLV
VSPLLSLMEDQVTQLKYVVKNRVIAFNSFRTLNEKREAMKKLSSYKFIFVSPEMLQSELL
IRELKKIHISLFVVDEAHCISQWGYDFRPDYKKLNVVIENIGSPTVLALTATATKGVLQD
IANSLNLKGAAEHVYSIDRPNIAMDVQFVETIEEKKEALLEQVMYLQGPGIVYCSSRAWT
ERLTEYLRGKGVTGVAFYHGGMEHEERMLIQQQFMNDQLQLVICTSAFGMGVNKANTRYI
IHFHYPTNIASYLQEIGRAGRDGEPSIAILLCSPLDHDLPISIIEDELPSKSQIQFLFSL
LQERMFQTKELPIEDVEEICYNAARFNEQYWRFVRYHLEQVGIIQQRRLLLEGLSDEIMN
RLIAEVEIRLRNKYSELENMKSWIQVKGCRREYVLQQFGYRKEQELINCCDYCGIIKEDY
KKRRAQQSDFDYNWETELQKLFGLEKMEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaagaatatttatataagtggtttggatattctgaatttcgtccaggtcaa
aaaggagttattacagatttattagaaggaaaagatgtgatagcaatgcttccgactgga
agagggaaatctatgtgctatcagtttccggggcttatgcgagaaggaacagtgcttgtt
gtatcaccgttattatctttaatggaagatcaagtgacacaattaaagtatgttgtgaaa
aaccgagtaatagcatttaatagttttcggacattaaatgaaaaaagagaagcgatgaaa
aaattatcttcatataaatttatttttgtttcaccagagatgttacagtcggagttatta
attagggaattgaagaaaattcatatttcattatttgttgttgatgaggctcattgtatt
tctcaatggggttatgattttagaccggactataaaaaactaaatgtagttattgaaaat
attggttctcctacagtattagcattgacagccacagcgacaaaaggggtactgcaggat
atcgcaaatagtttaaatttaaagggtgccgcggaacatgtatactctattgatcgtcct
aatattgcaatggatgtgcaatttgtagagacgatagaagaaaagaaagaggcgctttta
gagcaggtgatgtatttacaagggccggggattgtatattgctcaagtagagcgtggaca
gaaaggttaacggaatacttgagagggaaaggtgttactggtgtagctttttatcatggt
ggtatggaacatgaagagcgtatgttaattcaacagcagtttatgaacgatcaattgcaa
cttgtaatatgcacaagtgcatttggtatgggggtaaataaggcgaatacgcgatatatt
attcattttcattatccaactaatatagcttcttacttacaagaaatcggaagagctgga
agagatggcgaaccgagtatagctattttattatgtagtccgctggatcatgatttacca
atttcaatcattgaggatgaattgccaagtaagtcacaaatacaatttttattttcttta
ctacaagaaagaatgtttcaaacgaaagaattaccaatagaagatgtagaagaaatttgt
tataatgcagcaagatttaatgagcaatattggcgtttcgttcgttatcatctcgaacag
gttggaattatacaacaacgaagattattattagaaggtttgtcagatgaaattatgaac
cgattaatagctgaagtagaaataaggttgcgtaataaatatagtgagctagaaaatatg
aaatcatggatacaagttaaagggtgtagacgtgaatatgtgctgcaacagttcggttat
aggaaagagcaagagttaattaattgctgcgattattgcggtattataaaagaagattat
aaaaaaagacgagcgcaacaatcggatttcgactataattgggaaacagagttacaaaag
cttttcggcctagaaaagatggaggaatga
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