Bacillus bombysepticus: CY96_11095
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Entry
CY96_11095 CDS
T03597
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CY96_11095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bby03019
]
CY96_11095
03009 Ribosome biogenesis [BR:
bby03009
]
CY96_11095
Enzymes [BR:
bby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CY96_11095
Messenger RNA biogenesis [BR:
bby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CY96_11095
Ribosome biogenesis [BR:
bby03009
]
Prokaryotic type
rRNA helicases
CY96_11095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_19
RRM_ESF1
Motif
Other DBs
NCBI-ProteinID:
AHX18533
UniProt:
A0A9W3LAJ6
LinkDB
All DBs
Position
2153359..2154723
Genome browser
AA seq
454 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFV
LPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPDSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFIMD
RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQREIIEQPKIKRVDENGKPVPKPAPKKSGQNRQRDSREGSRSDSRRDSRNSSR
SDLRNSSRNENNRSFNKPSNKKGSTKQGQQRRGR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacttttaatcatacatta
cgtgaaaatggaattacagaagcaacaccaattcaagagcaggcaattcctgttattatg
tctggtaaagatattattgggcaggcaaaaacaggtacgggtaaaacgttagcattcgtg
ttaccgattttagaaaaaatcgatccagagtctagtgatgttcaggccttaattgttgca
ccaacaagggaactagctctgcaaattacaactgaaattaaaaaaatgcttgttcaaaga
gaagatattaatgtactagcgatttatggtgggcaagatgtagcacaacaattgagaaaa
ttaaaaggtaatacacatattgttgttgcaacaccaggacgattattagatcatatacga
cgtgaaacaattgatttaagtaatctttcaacgattgtactagatgaagcggatcaaatg
ctttatttcggtttcttatatgatattgaagatattttagatgagacacctgatagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattggcgaaacgttat
atggatgagccgcaaatgattcaagtacaaagtgaagaagtaacggttgatacaattgag
cagcgtgtcattgagacgacagaccgtgcaaagccagatgcacttcgttttattatggat
cgtgatcagccatttttagctgttattttctgtcgtacaaaggttagagcaagtaagctt
tatgataatttaaaaggattaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagctaaaattcagtacttaatcgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcacgtatttaactatgat
atccctgaagatgtagaaagttacattcaccgcattggccgaacaggacgtgcaggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccaatacaaagagaaataatcgaacaaccgaagataaaacgtgta
gatgaaaatggaaaaccggtaccaaagccggctccgaagaaatcaggtcaaaatcgtcaa
agagatagccgcgaaggttcaagaagtgattcaagacgtgattccagaaatagctcaaga
agtgatttaagaaatagttcgagaaatgaaaataaccgatcatttaataagccaagtaat
aaaaaaggtagtacaaagcaaggtcagcaaagacgtggtcgttaa
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