Bacillus bombysepticus: CY96_12845
Help
Entry
CY96_12845 CDS
T03597
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CY96_12845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bby03019
]
CY96_12845
03400 DNA repair and recombination proteins [BR:
bby03400
]
CY96_12845
Enzymes [BR:
bby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CY96_12845
Messenger RNA biogenesis [BR:
bby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CY96_12845
DNA repair and recombination proteins [BR:
bby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CY96_12845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_7
A-ATP_synth_H_N
HTH_45
GerE
HEM4
HTH_10
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AHX18853
UniProt:
A0A9W3LHD6
LinkDB
All DBs
Position
complement(2516700..2518817)
Genome browser
AA seq
705 aa
AA seq
DB search
MFTKAQELLASYFGYSSFRRGQDETIKNVLDGKDTVCIMPTGGGKSICYQIPALVFEGTT
LVISPLISLMKDQVDTLVQNGISATYINSSISIAEANQRIQLAKQGHYKLLYVAPERLDS
MEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLILALTATATPQ
VRDDICNTLEINQENTIMTTFERENLSFSVIKGQDRNAYLADYIRQNQKESGIIYAATRK
VVDQLYEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK
LQNMTDYCHTEQCLQSFILQYFGEEPKEDCGRCGNCTDNRESIDVTRESQMVLSCMIRTN
QRFGKQMIAQVLTGSKNKKVIEFNFHTLPTYGLLSNRSVKEVSEFIEFLISDELIAVEHG
TYPTLKVTEKGKEVLLGKENVLRKERVETRQIVQDHPLFEVLREVRKEIAQGEGVPPFVI
FSDQTLKDMCVKMPQSDSELLTVKGIGEHKLVKYGSRFLQAVQHFIEENPNYAETIKTEV
VSERKKSGKASANSHLETYEMYKQGIDLNEIAKERNLSRQTIENHLIRCYEDGMEVDWQS
FVPAEYESLIETAVQNADGGLKSIKEQLPNEVSYFMIRAYLQIRK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactaaagcacaagaacttttagcgtcctactttggttattcttcgtttcgaaga
ggacaagatgaaacaattaaaaatgtactagatgggaaagatacggtttgtattatgcca
acgggtggcggtaagtcgatttgttatcaaattccggcattagtatttgaaggaacgacg
ttggttatatcacctttaatatcacttatgaaggatcaagtagatacattggtacagaat
ggcatttcagctacatatattaatagttctatatctattgcagaagcaaatcagcgaatt
caattagcgaaacaaggacattacaagttactttatgtggcgcctgagcgtcttgattcg
atggagtttgttgaccaacttatcgatatgaaaatccctatgattgcgattgatgaagca
cattgtatttcacagtggggacatgatttccgtccaagttatttacatatacatcgcata
ttagattatcttccagaaaaaccgctcatattagcattaacagcaacagcaacaccgcaa
gtacgtgatgatatttgtaacacacttgaaattaatcaagaaaatacaattatgacaacg
tttgagcgtgagaatttatcgttttctgtcattaaagggcaagatcgaaatgcatatttg
gcggattatattcgtcaaaatcaaaaggaatctgggattatatatgcagctactagaaaa
gtagtcgatcagttatatgaagatttgatgaaggcaggtgtttctgtatcaaaatatcat
gctggtatgagtgatagtgatagaaatgagcaacaagaactctttttacgagatgaagta
agtgtaatggtagcaacatctgcattcgggatggggattgataaatcgaatattcgttac
gtaattcattatcagcttccaaaaaatatggaaagttactatcaagaagcaggacgtgct
ggtcgtgacggattagatagtacatgtatattgttatattcttctcaagatgtacaagta
cagcgttttttaattgatcaatcaactggagaatcacgtttttcaaatgaacttgaaaaa
ttgcaaaatatgaccgattactgtcatacagaacaatgtttacaatcattcattttgcaa
tactttggagaagaaccgaaagaagattgtggacgctgtggtaattgtacagacaatcgc
gagagcatcgatgtgacaagggaatcacaaatggttttatcatgcatgattagaaccaac
caacgctttggaaagcaaatgatagcgcaagtattaactgggtcgaaaaataagaaagtt
attgaatttaattttcatactttaccaacgtatgggcttttatcgaaccgtagtgtaaaa
gaggtcagtgagtttattgagtttttaatttcagacgagttaattgcagttgaacatggc
acttatccgacgttaaaagtaactgaaaaagggaaagaagtattacttggtaaagagaat
gttttacgaaaagaacgagtagagacaagacaaattgttcaagaccatcctttatttgaa
gtgcttcgtgaagtacgtaaagaaattgcacaaggagaaggtgtacctccgttcgttatt
ttttctgaccaaacattaaaagatatgtgtgtgaaaatgccgcaaagtgattccgaattg
ttgacggtaaaaggtatcggagaacacaaacttgtgaaatatggctcgcgctttttacaa
gcagttcagcattttattgaggaaaatccaaattatgctgaaacgattaagacagaagta
gtttcagagcgtaaaaagtcaggaaaagcgtccgcaaattctcatttagaaacgtatgaa
atgtataaacaaggtattgatttgaatgagattgcaaaagaacgtaacttatcaagacaa
acaatcgaaaaccatttaattcgctgctatgaggatggaatggaagtagattggcaaagc
tttgttccagcagagtatgaatctcttattgaaactgccgttcaaaatgcagatggtggt
ctgaaatctattaaagaacagcttccgaatgaagtgagttactttatgattcgtgcttat
ttacaaataagaaagtag
DBGET
integrated database retrieval system
