Bacillus bombysepticus: CY96_18110
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Entry
CY96_18110 CDS
T03597
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CY96_18110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bby03019
]
CY96_18110
03016 Transfer RNA biogenesis [BR:
bby03016
]
CY96_18110
Enzymes [BR:
bby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CY96_18110
Messenger RNA biogenesis [BR:
bby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CY96_18110
Transfer RNA biogenesis [BR:
bby03016
]
Prokaryotic type
tRNA degradation factors
CY96_18110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
S1_RRP5
KorB
Motif
Other DBs
NCBI-ProteinID:
AHX19830
UniProt:
A0A9W3PS87
LinkDB
All DBs
Position
complement(3549259..3551397)
Genome browser
AA seq
712 aa
AA seq
DB search
MSQEKQVFSIDLAGRQLTVETGQLAKQANGAVLVRYGDTAVLSTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSV
DQDCSSEMAAMLGSSLALSISDIPFEGPIAGATVGRINGEFVINPTVEQQEQSDIHLVVA
GTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKEKTEVKLYEVDA
DLNQAVREMAEEDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEADADTLGQVNEILYK
IVKEEVRRLITVEKIRPDGRKGDEIRPLASEVGILSRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKTGEHYTILS
DIQGMEDHLGDMDFKVAGTAQGVTALQMDIKIDGLSREILEEALQQAKVGRVHILNHMLS
VIPEPRTELSAYAPKIITMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
INQEMNDKAKKIIEDIVREVQVGEIYEGKVKRVEKFGAFVELFSGKDGLVHISELALERV
GKVEDVVKIGDVITVKVIEIDKQGRVNLSRKVLLKEEQEKEAAKEENKQEQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaaaagcaagtcttctcgatagatttagctggtcgccagctaacagttgaa
actggtcagcttgcaaaacaagcgaacggagcagtattagtaagatatggcgatacagcg
gttctatctacagcaactgcatcaaaagaagcaaaaaatgtagatttcttcccacttaca
gtaaactatgaagagcgtttatatgcagtcggaaaaattcctggcggtttcattaaacgt
gaaggtcgtccaagtgaaaaagcaattttggcaagtcgtttaatcgaccgtccaatccgt
ccacttttcgcagatggtttccgtaacgaagtacaagttgtcagcatcgtaatgagtgtt
gatcaagattgttcttctgaaatggcagctatgcttggttcttcattagcgttatcgatt
tcagatattccatttgaaggtccaatcgcgggtgcaacagttggtcgtattaacggcgaa
ttcgttatcaacccaacagtagaacagcaagaacaaagtgatattcaccttgttgtagct
ggtacgaaagatgcaattaacatggttgaagcaggagcagatcaagtgcctgaggaaaca
atgttagaagcaattatgtttggtcatgacgaaattaaacgtctaattgcattccaagaa
gagattgtacaagctgtaggtaaagagaaaacagaagtgaaactttatgaagttgacgct
gatcttaaccaagctgtacgtgaaatggctgaagaagatatgcattcagcaattcaagta
catgagaagcatgcacgtgaagatgcaattaacgaagtgaaaaagcgtgttattgagcat
tacgaagcgcaggaagctgacgctgatacattaggacaagtaaatgagattttatataaa
attgtaaaagaagaagtacgtcgtcttattacagttgaaaaaatccgcccagatggccgt
aaaggtgacgaaatccgtccattagcatcagaggttggcattttatctcgtacacacggt
tctggtttgttcactcgtggacaaacacaagcattaagtatttgtacattaggtgcatta
ggcgatgtgcaaattttagatggtcttggtgtagaagaatcaaaacgctttatgcaccat
tacaatttcccatcatttagtgttggtgaaactagaccaatgcgtggaccaggtcgtcgt
gaaatcggtcacggtgcactaggagaacgcgcacttgagcctgtaattccatctgaaaaa
gatttcccatacacagtacgtcttgtatctgaagttttagaatcaaatggttctacttca
caagcaagtatttgtggtagtactttagcaatgatggatgctggtgttccacttaaagct
ccagttgcaggtattgcaatgggtctagttaaaactggtgagcattacacaattttatct
gatattcaaggtatggaagatcatttaggtgatatggactttaaagtagcaggtacagca
caaggtgtaactgcactacaaatggacattaaaatcgatggtctatctcgtgagatttta
gaagaggcattacaacaagcgaaagttggtcgtgtgcacattctaaatcatatgttatct
gttattccagagccacgcactgaattatcagcgtacgctccaaagattattacaatgaca
attaatccagataaaatccgtgacgttatcggaccgagcggtaaacaaatcaataaaatt
attgaagaaactggcgttaaaattgacatcgagcaagatggcacagtattcatttcttca
ataaaccaagaaatgaacgacaaagctaagaaaattatcgaagatatcgttcgcgaagta
caagtaggtgaaatctacgaaggaaaagtgaaacgtgttgagaaattcggtgctttcgtt
gaattattcagcggtaaagatggattagttcacatttctgaacttgcacttgagcgtgta
ggtaaagtagaagacgttgtaaaaatcggtgacgtaattacggttaaagttatcgagatt
gacaagcaaggtcgtgttaatctatctagaaaagtattgctaaaagaagagcaagaaaaa
gaagctgctaaagaagaaaacaaacaagagcagcaataa
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