Bacillus bombysepticus: CY96_22175
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Entry
CY96_22175 CDS
T03597
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03030
DNA replication
bby03430
Mismatch repair
bby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CY96_22175 (dnaE)
03430 Mismatch repair
CY96_22175 (dnaE)
03440 Homologous recombination
CY96_22175 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bby03032
]
CY96_22175 (dnaE)
03400 DNA repair and recombination proteins [BR:
bby03400
]
CY96_22175 (dnaE)
Enzymes [BR:
bby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CY96_22175 (dnaE)
DNA replication proteins [BR:
bby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CY96_22175 (dnaE)
DNA repair and recombination proteins [BR:
bby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CY96_22175 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AHX20605
UniProt:
A0A9W3PT11
LinkDB
All DBs
Position
complement(4308475..4311801)
Genome browser
AA seq
1108 aa
AA seq
DB search
MKFVHLQCQTVFSLLKSACKIDELVVRAKELGFSSLAITDENVMYGVIPFYKACKKHGIQ
PVIGLTASIFSEEEERSYPLVLLAENEIGYQNLLKISSSIMTKSKEGIPKKWLAHYAKGL
IAISPGKDGEIEQLLLEDNESQAEEVARTYQNMFGHFYMSLQHHAIQAELLLQEKLPEFI
SRVNIPVVATNDVRYINQSDALVHECLLSVESGTKMTDPDRPRLKTDQYYLKSSDEMEAL
FSHAPEAIQNTIKIAERCQVEIPFHVNQLPKFPVPSNETSDIYLRRVCEEGLRKRYGEPK
EVHIKRLNHELNVISRMGFSDYFLIVWDFMKYAHENHILTGPGRGSAAGSLVSYVLEITD
IDPIEYDLLFERFLNPERVTLPDIDIDFPDVRRDEMIRYVKDKYGQLRVAQIVTFGTLAA
KAAIRDIARVMGLPPRDIDIFSKLIPSKLGITLKDAYEESQSFREFIQGNLLHERVFEIA
KRVEGLPRHTSIHAAGVIMSQEPLTGSVAIQEGHNDVYVTQYPADALEELGLLKMDFLGL
RNLTLLENIIKFIANKTGKEIDIRNLPLQDEKTFQLLGRGDTTGVFQLESGGMRNVLRGL
KPNEFEDIVAVNSLYRPGPMEQIPTFIESKHGKRKIEYLHPDLKPILERTYGVIVYQEQI
MQIASKLAGFSLGEADLLRRAVSKKNRDILDQERKHFVQGCLQNGYDETSAEKIYDLIVR
FANYGFNRSHAVAYSMIGYQLAYLKANYTLEFMTALLSSAIGNEDKIVQYIRETKRKGFH
VLPPSLQRSGYNFQIEGNAIRYSLLSIRNIGMATVTALLEEREKKMFEDLFEFCLRMPSK
FVTERNLEAFVWSGCFDDFGVSRTNLWKSIKGALEYANLARDLGDAVPKSKYVQGEELSF
IEQLNKEKEVLGFYLSSYPTAQYVKLAKELEIPSLAQAMRHKKKVQRAIVYITSVRVIRT
KKFQKMAFITFCDQNDEMEAVLFPEMYIHFSDKLQEGAIVLVDGTIELRNHKLQWIVNGL
YPLEEMDVYEEKKDASVYVKLPSQYEKKLLNRVTKILFDYSGFAKVLIYYEKEHKMVQLS
RSLSIHPSEECLGALREIVGEENVVVKI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttgtgcatttacaatgtcaaaccgtttttagtttattaaaaagtgcttgtaaa
attgatgaacttgtagtcagggcgaaagaacttggtttttcatcgctggctattacggat
gaaaatgttatgtatggtgttattccgttttataaagcatgtaagaaacatggtatacag
cctgttattggattaaccgcttctatttttagtgaagaagaagaaaggtcttatccgctt
gtattacttgctgagaatgaaataggctaccaaaatttattaaagatttctagcagtatt
atgacaaagtccaaagaaggtattcctaagaagtggcttgcgcattatgcgaaaggatta
attgctatttcaccaggtaaagatggcgaaattgagcaattattactagaagacaatgag
agtcaggctgaagaagtagctcgcacgtatcaaaatatgttcggccatttttatatgagt
ttgcagcatcatgcgattcaagctgagttgcttttacaagagaaactacctgaatttatt
agtagggttaatattccagtcgttgcaacaaatgatgtgcgctatatcaatcaaagtgac
gcgcttgttcacgaatgtttactatctgttgaaagtggaacgaaaatgactgatccagat
aggccgaggctgaaaacagatcagtattatttaaagtcatcggatgaaatggaagcacta
ttttcccatgcgccggaagcaatccaaaatacaataaaaattgcagagcgttgccaagta
gaaataccgttccatgtaaatcaacttccgaagtttcctgttccgtctaatgaaacgagt
gatatatacttgcgtcgtgtttgtgaagaaggtttgcggaaacgatatggtgaaccgaaa
gaagtgcatataaagcgtttgaatcatgaattaaatgttatttctcgtatgggatttagt
gattatttcctcatcgtatgggattttatgaagtatgcacatgaaaatcatattctaaca
ggaccaggtcgtggatcggcagctggttcactcgtttcatacgtattagaaattacagat
attgatccaattgaatacgatctattatttgaaaggtttttaaatcctgaacgtgtgacg
cttcccgatattgatattgattttccagacgtaagacgtgatgagatgattcgctatgtg
aaagataaatacggtcagctccgtgttgcgcaaattgtaacgtttggtacgcttgcagca
aaagcggcaattagagacattgcccgcgtaatggggcttccgccgcgagatattgatata
ttttcaaaacttatcccatcaaagcttggtataacgttaaaagatgcatatgaagaatca
caatcatttcgtgagtttatacaagggaatcttctgcatgagcgtgtgtttgaaatcgca
aaacgtgtagaaggtttaccacgtcatacgtctattcatgcggctggtgttattatgagt
caagaaccgctaacaggcagtgtagcaattcaagaaggacataacgatgtttatgttacg
caatatccagccgatgcgctagaagaacttgggttgcttaagatggactttttaggatta
cgtaatttaacgttacttgaaaatattataaaatttatcgcgaacaaaacagggaaagaa
atcgatataagaaacttacctcttcaagatgaaaagacgttccaattattagggagaggg
gatacaacaggtgtattccagcttgagtcaggtggtatgcgaaatgtacttcgcgggtta
aaaccgaatgagtttgaagatatcgtagctgttaactcgttatacagaccaggaccgatg
gaacagataccgacttttattgaatcgaaacatggaaaaagaaaaatcgaatatttacat
ccggatttaaagccaattttagaaagaacatacggcgtcattgtataccaagaacaaatt
atgcaaattgcatcgaagttagctgggttttcgcttggagaagcagatttactgcgccgt
gcggtgagtaaaaaaaatcgtgatattttagatcaggaacgtaagcatttcgtccaagga
tgtttgcaaaatggttatgatgagacgtctgctgaaaaaatttatgatttaattgtaaga
tttgcgaattacggttttaaccgaagtcacgctgtagcttacagtatgatcggatatcag
cttgcctatttgaaagcaaactatacgctggaatttatgacggcattattatcaagtgca
attggaaatgaagataagattgtacagtatatacgagaaacgaagcggaaaggttttcac
gttttgccgccgtctcttcagagaagtggttataacttccaaatagaagggaatgcgata
cgttacagtttactttcgatccgaaatattggaatggctacagtgacggcattattagaa
gaacgagagaaaaaaatgttcgaagatttatttgaattttgtctccgtatgccgtcaaag
ttcgtaacggagcgtaatttagaagctttcgtctggtcgggatgttttgatgattttggt
gtttcgagaacgaatttatggaaaagtattaaaggggcgttagagtacgcgaatctcgca
cgtgatttaggagatgctgttccaaaatcaaaatatgtacaaggagaagagctatctttt
attgaacaactaaataaagagaaggaagtacttggcttttatttatcaagttatccgaca
gcgcaatatgtgaagttagcaaaagaattagaaattccatctctcgctcaggcgatgcga
cacaagaaaaaagtacaaagagctattgtgtatataacaagtgttagagtgattcgtacg
aaaaagtttcaaaagatggcatttattacattctgtgatcaaaatgatgaaatggaagcg
gtcctcttcccggaaatgtatatacatttctcggataagttgcaagaaggagcaattgtt
ttagttgacggtacgattgagctaagaaatcataagctgcaatggattgtaaatggacta
tatccgctagaggaaatggatgtttatgaagaaaagaaagacgcatctgtttacgtgaaa
ttgccatctcagtatgagaaaaagcttttaaatcgggttacgaaaatattgttcgactat
tcaggttttgcgaaagtactaatttattatgaaaaggaacataaaatggtacaattatct
cggagtttatcgattcatccaagtgaagaatgtttaggagcacttcgtgaaattgtcggg
gaagaaaatgtagttgtgaaaatataa
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