Bacillus bombysepticus: CY96_27125
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Entry
CY96_27125 CDS
T03597
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CY96_27125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bby03021
]
CY96_27125
03400 DNA repair and recombination proteins [BR:
bby03400
]
CY96_27125
Enzymes [BR:
bby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CY96_27125
Transcription machinery [BR:
bby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CY96_27125
DNA repair and recombination proteins [BR:
bby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CY96_27125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AHX21517
UniProt:
A0A9W3KYC1
LinkDB
All DBs
Position
5256614..5260225
Genome browser
AA seq
1203 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEALLAYQNGYVHLHTRVAVA
ASAVNNATFTEEQKSMLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAKYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFQITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVTPGQPISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVY
VEQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaactattaactatcgtacgttaaag
cctgaaaaagatggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcaaaagtacgtcgtgaacgtatgggtcatattgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcaattaaaaagctactacaa
gacatcgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaactctgga
aatgaaccgtcttggatgatcttagatgttctaccagtaattccaccagaactacgccca
atggtacagttagacggtggacgttttgctacttctgacttaaacgacttataccgtcgt
gtaattaaccgtaacaatcgtttaaaacgtctattggacttaggtgcaccaagcatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgtagacgcattaatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattaaaatcactatctcacatgctt
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactactctggt
cgttctgtaatcgttgtaggaccgaacttaaagatgtatcaatgtggattaccaaaagaa
atggcgcttgaactgttcaaacctttcgtaatgaaagagttagttgaaaaaggattagca
cataacattaagagtgcgaaacgtaaaatcgagcgtgtacaacctgaagtttgggacgtt
ttagagtctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtatccaggcgtttgaacctacattagtagaaggtcgcgcaatccgtcttcaccca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggccgttcacgtacct
ttatcatcagaagctcaagctgaagctcgtcttcttatgttagcggcacaaaacatcttg
aacccgaaagacggtaaaccagttgttactccatctcaggatatggtattaggtaactat
tacttaacacttgagcgtgaaggtgcaatcggtgaaggtatggtcttcaaagatgcaaac
gaagcattgcttgcatatcaaaatggatatgttcatcttcatacacgtgttgcagtagct
gcaagtgcagtaaacaacgcaacatttactgaagagcaaaagagtatgcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccaacaaattcaaaccttgaaaaagaaacaccagcgaaatatttcgttgaaaaaggtgcg
aacattaaagaaattattgctagtcgcgaagaagtggcgccatttagcaagaaaatcctt
ggtaacatcattgcggaagtattcaaacgtttccaaattacagaaacgtctcgcatgctt
gaccgtatgaaaaacttaggattcaagtactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggcgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaaatccttg
aataaacgcaacccaatcttcatgatgagtgactcaggtgcccgtggtaacgcatctaac
tttactcagcttgctggtatgcgtggtcttatggccaatccatctggtcgtatcatcgaa
cttccaatcaaatcgagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
cacggtgcgcgtaaaggtcttgctgatacagcacttaaaactgccgattctggttactta
acacgtcgtcttgttgacgttgcacaagatgtaatcgttcgtgaagatgattgtggaaca
gatcgcggtttattaatcggtgcgattaaagagggtaatgaagttatcgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttgctgaaaatcaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaacattcgttcagcgtttacgtgtaacactcgccacggtgtatgtaag
aagtgttacggtcgtaacttagcaactggaacagacgtagaagtaggagaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacattccat
acaggtggggttgccggagatgatatcactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgacgttaaagatcgccaagaagtagttgtacagggtgaagttgaagctcgtacg
tatgctattccttacggtgctcgtctgaaagtaactccaggacagccaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattacg
gcggttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaagtaatggtacgtcaaatgttacgtaaagttcgtgtaagt
gatgcaggtgaaacagatgtattaccaggaacattactagatatccatcagttcactgat
gcgaatgctaaggtcttactgcaaggtaagcaaccagcaacagctagacctgttctactt
ggtattacaaaagcttcacttgaaacagattcattcttatctgcagcatcgttccaagaa
acaactcgtgtcttaactgatgcagcaattaagggtaaacgcgatgaacttctaggatta
aaagaaaatgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgtaaaaacaacacaagatgacatgaatgtagaaaacgatgaggtttat
gtggaacagtaa
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integrated database retrieval system
