Bacillus bombysepticus: CY96_29900
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Entry
CY96_29900 CDS
T03597
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bby
Bacillus bombysepticus
Pathway
bby03420
Nucleotide excision repair
bby03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CY96_29900
03430 Mismatch repair
CY96_29900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bby03400
]
CY96_29900
Enzymes [BR:
bby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CY96_29900
DNA repair and recombination proteins [BR:
bby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CY96_29900
MMR (mismatch excision repair)
Other MMR factors
CY96_29900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
AAA_11
AAA_22
DEAD
Flavi_DEAD
MOSP_N
Motif
Other DBs
NCBI-ProteinID:
AHX21938
UniProt:
A0A9W3LKK6
LinkDB
All DBs
Position
pBb:complement(555548..557347)
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AA seq
599 aa
AA seq
DB search
MYINLNPFQQAVIDEEGNTLVIACPGSGKTRVLTMKIAKELENLKKRTNRIAALTFTNRA
ADEIDKRIHEMGIDSSKLWTGTIHSFCLQWIIKPYGGYLPELQKGFSILDEFKAQDLKSR
FKNDFAIPRYEDFITRRDRQGNYINAERNFNEAAETYHKYILENKLIDFDLILYFSYLLL
GKYPKIANNLSRIFKYFFIDEFQDTQDLQYAIVGKIVWAAEGQCKIFLVGDPDQAIFKSL
GGVVKSSTEISQEIGGYSIKKLGLNGNYRSTQRIINLYSNFQSTDLSIESLTNYCDEDGV
ISFDRTIHKENLVEKITEIIQEQISDGVPPNEICVLAPQWSFLTSMARKLKSHLPDVAFD
APGLTILPRDRDNFWFKIARIILINQEPNKYLIRMKWAKEILEELVMLNSTIIHVEIESC
RKFLKIINSINIPKEDAVEYLEEAFKYIFEKIGFDYSSSDLLIEQWKSFFNGLSRRYEHI
DFSDIPKDINYMKKMFNTKKGVVINTCQGVKGEEFHTVIAFGLLRGYVPHWSQIINRPTS
NEIEESNKLLYVICSRAKKNLFLFSESGRLTQSKQPYQVNNQLNRIVFEFNSLAPYRSE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaatttaaatccttttcagcaagctgtaatagatgaagaggggaatacgctt
gtaatagcttgtccaggtagtggtaaaacaagggtattaacaatgaaaattgctaaagag
cttgaaaacttaaaaaagagaactaatagaattgcagcgttaacatttacaaatcgcgca
gctgatgaaattgataaaagaatacatgaaatgggcatagacagctctaaattatggaca
ggtacaattcattcattttgcttacaatggattattaaaccatacggaggttatttacca
gaacttcagaaaggtttttctatactagatgaatttaaggcacaggatttaaagagtaga
tttaaaaatgacttcgctatacctagatacgaagattttatcaccaggagggacaggcag
ggaaattatataaatgcagaaagaaattttaatgaagctgccgaaacctatcacaaatat
atcttagagaataaattaatagattttgatttgattttatatttttcttatttattgctt
ggaaagtatcccaaaattgctaataatctttctagaatttttaaatatttttttatcgat
gaattccaggatactcaagatctccaatatgcaattgtcggaaaaatagtctgggcagct
gaaggacaatgtaaaattttccttgtcggagatccggatcaagcaatatttaaatcatta
ggtggcgttgtaaaatcttctacggaaataagccaagagattggagggtatagcattaaa
aaattagggttgaacggtaattataggtcaacacaacgtattataaatttatacagtaat
tttcaaagtacagatttatcaattgaatcattgactaattattgtgatgaagatggagtt
atttcgtttgatagaactatacataaagaaaatttggtagagaaaatcacagaaattata
caagaacaaatttccgatggagttcccccgaatgaaatttgcgtactagcaccgcaatgg
agttttcttacctctatggctagaaaattgaaatcacatttaccagatgtagcgtttgat
gctccaggcctaactattttgccgcgggatcgggataatttttggtttaaaattgcgagg
attattttaataaaccaagagcctaataagtatttaattagaatgaaatgggcaaaagaa
atcttagaagaattagttatgttgaatagtactattattcatgttgagatcgaaagctgc
aggaaattcttaaaaataataaattctataaatataccaaaagaagatgcggtcgaatat
ttagaagaagcctttaagtacatatttgaaaagataggttttgattatagttccagtgat
ttattgatagaacagtggaagagtttttttaatggactaagtcgccgttatgagcatata
gattttagtgatattcctaaagatattaactatatgaaaaagatgtttaatacaaaaaaa
ggggttgttattaatacttgtcaaggtgttaagggagaagagtttcatacggtgattgct
tttggcctgttaagaggatatgttccacactggagtcaaataattaatcgacctacaagt
aatgaaatagaagaatcaaataaattattatatgttatatgttctagggctaagaagaat
ttgtttttattttcggaaagtggaagattgacacaaagtaaacaaccgtatcaagtaaat
aatcagttgaatagaattgtttttgagtttaatagtctagcaccatatagatcggagtga
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