Bacillus cereus ATCC 10987: BCE_0051
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Entry
BCE_0051 CDS
T00162
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bca
Bacillus cereus ATCC 10987
Pathway
bca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCE_0051 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bca03400
]
BCE_0051 (mfd)
Enzymes [BR:
bca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCE_0051 (mfd)
DNA repair and recombination proteins [BR:
bca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BCE_0051 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
MFD_D3
UB2H
RecG_dom3_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAS38987
UniProt:
Q73FF5
LinkDB
All DBs
Position
54537..58067
Genome browser
AA seq
1176 aa
AA seq
DB search
MIGLLEQFYKNEEIQSVINGLEDGLKEQLVSGMATSSRSLLMAALYKKTKKSQLIVTHNL
YQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQRIEVLNRLAAGEHGIIVA
PVAGLRRFLPMKELWKQRQIEISLGQEIDLDTFLHTLHHIGYERKSMVEAPGEFSLRGGI
LDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQDKKESVRFGPATEFLFSQEELKSGI
KHLEEGLTKTMQKLSDDKLKTTVLETVSHEIEMLKNGQSIEQMFKYLSIFYNEPASLIDY
LPEDGVVILDEISRIQETASHLETEEAEWYISLLGEGTIIQDLSFSHSFEEFLHHKKRSF
VYLTLFLRHIAHTHPQNIVNVTCKTMQDFHGQMQLLKTEIDRWNEGHFTTVVLGTDDERV
KKLQHILSDYDIEADIVEGTDILLPGRLQIAVGDLHAGFEMPMQKLVVITEKELFHKKVK
KSQRKQKLSNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGND
KLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREA
SKGYAYTPDTAEQQEFESSFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEV
AIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIK
GLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTAT
PIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYN
RVEDIERKADEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDI
PNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFT
ELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRRGTDGVENTVN
VEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLL
QIANIKVLAMKEQIELIKQNKFEVTILFSEQASQNIDGGKLFMLGNSFGRMIGLGMEGSQ
LKIVMKTNGLETSKWLTIAENLLKGLPDVKKEVINA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgataggtttattagagcaattttataaaaatgaagagatccaatcggtcattaatgga
ttagaagatggtttaaaagagcaacttgtatcaggtatggcaacctcttctcgttcgtta
ttaatggcggccttatataaaaaaacaaaaaaatcacaacttattgtgacgcataattta
tatcaagcacaaaaagtacatgaagatttagtggcgttacttggtgaaaaagatgtatgg
ctatatccagtaaatgaattgatagcatcagaacttggtgttgcaagcccagaattgaag
gcgcaacgtattgaagtgttaaatcgcttagctgcaggagagcacgggattattgtagca
ccagttgcaggactacgcagatttttaccaatgaaagagttgtggaagcaaaggcaaatc
gaaatcagtctagggcaagagattgatttagatacatttttgcatactttacatcatatc
ggctatgagcgtaagtctatggtagaagctcctggagaatttagtttgcgtgggggaata
ttagatatatatccactaactgaagagttaccatttcgtattgaatttttcgatacagaa
gtcgattctattcgattatttgatgtggatgaacagcgctctcaagataaaaaagaaagt
gttagatttggtccagcaacagagtttttattttcgcaggaagaattgaaatcaggaatt
aagcatcttgaagaaggtctgactaagacgatgcaaaaactttctgatgataagttgaag
actacagtgcttgagacggtaagtcatgaaattgagatgttaaaaaacgggcaaagtata
gaacagatgtttaaatatttatctattttctataatgaacctgctagtctgatagattat
ttaccagaagatggtgttgttattttagatgagatttcacgtattcaagaaacagcatca
catcttgaaacggaagaggcggaatggtatatatcccttctcggtgagggaacaattatt
caagatttatctttctctcattcgtttgaagaatttcttcatcataaaaaaagaagtttt
gtatatttaacgttattcttacgtcatatagcacatacacatccgcaaaacattgtgaat
gtgacatgtaaaacaatgcaagatttccatgggcagatgcagttgttgaaaactgaaatt
gatagatggaacgaagggcattttacgactgttgtgttaggtacagatgatgaacgtgtg
aaaaaactacaacatattttaagtgattatgatattgaggcagatattgtagaaggcaca
gatatattattgcctggaaggttacaaattgctgtaggtgatttacatgcaggatttgaa
atgccgatgcaaaagcttgttgtcattactgaaaaagagctttttcataagaaagttaaa
aaatcacaacgtaagcaaaagttatcgaatgctgaacgtattaaaagttattcggaatta
aaagttggggattatgtagttcatgtaaatcatggtataggtaaattcttaggtattgaa
acattagagattaacggtgttcataaagattatttgaatattaaatatcaaggtaatgat
aagttatacgttccaattgaacaaattgaccaagtgcaaaaatatgtaggatctgagggt
aaggatccgaaagtttataaattgggtggaaatgattggaagaaggtcaaaacgaaagtt
gaaaaatctgtacaagacattgcggatgacctaattaaactatatgctgagcgcgaagct
tcaaagggttatgcatatacaccggatacggcagaacaacaagaattcgagtcctctttc
ccgtatcaagagacagaggatcaattacgttctattgaagagattaaaaaggatatggaa
cgcggacgtccgatggataggcttctttgtggtgatgtaggatatggaaagacggaagta
gctattcgtgcggcgtttaaagcaattatggatgaaaaacaagttgcaattttagtgccg
acaacgatccttgcacaacaacactatgaaacaattcgagagcgttttcaagattatcca
atcaatataggattattaagtagattccgtacgagaaagcagcaaaatgaaacaattaaa
ggtttaaaagatggcacagtagatattgtaatcggaacgcaccgtattttatctaaagat
gttacttataaagatttaggtcttcttattattgatgaagaacaaagatttggtgtaacg
cataaagaaaaaattaaacaattaaaagcaaatgttgacgtattaacactaacggcaact
ccgattccgcgtacgctccatatgtctatgcttggtgtgcgtgatttatctgttattgag
acgccgccggaaaatcgtttcccggttcaaacatatgtagtagagtataatccagcatta
atgcgagaagcgatagaacgggagcttgcaagaggtggtcaagtttacttcctatataat
cgtgtagaggatatcgaacgaaaagcagatgaaatttcgatgttagttccagatgcgcgt
gtaacttatgcacatgggaaaatgaacgagagtgaattagagtctgttatgctatcgttt
ttagaaggacagcatgatgttcttgtaagtacaacgattattgagacgggtgtagatatt
ccaaatgtaaatacattaattgtatttgatgcagatcgtatgggattatcgcagttgtat
cagcttcgtgggcgtgttggacgttctaatcgtgttgcatatgcttactttgcatacaaa
cgggataaagtgttatcggaagttgcggagaagcgcctgcaagccattaaggagttcaca
gagcttggatctggtttcaaaattgcgatgcgagatttatcaattcgtggtgctggtaac
ttgttaggagccgaacaacatggatttattgattctgtcggatttgatttatattctcaa
atgttaaaagatgcaattgaacagcgtagaggaacagacggagttgaaaatacagttaat
gttgaaattgatttagaagtagatgcatatttaccggatgcttatatttctgatagtaaa
caaaaaattatgatgtataaacagtttagaggtgtttctgcaattgaggatattgaagag
ttgcaggaagagatgatagatagatttggtgattacccgcaagaagttggttacttatta
caaatcgcaaatattaaagtattagcaatgaaagaacaaattgaattaattaagcaaaat
aaatttgaagtaacaattctgttctcagaacaagcgagtcaaaacattgatggcggaaaa
ttattcatgcttggaaatagttttggacgaatgatcggtctaggaatggaaggatcacaa
ttgaaaatcgtcatgaaaacaaatggcttagagacatcgaagtggttaacaattgctgaa
aatttattaaaaggcttgccagatgtaaaaaaagaagtcataaatgcctaa
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