Bacillus cabrialesii: EFK13_06005
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Entry
EFK13_06005 CDS
T08101
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bcab
Bacillus cabrialesii
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_06005
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFK13_06005
Archaeal homologous recombinant proteins
EFK13_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_19
ABC_tran
Exotox-A_target
Motif
Other DBs
NCBI-ProteinID:
UQE80130
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All DBs
Position
1175186..1178581
Genome browser
AA seq
1131 aa
AA seq
DB search
MKPIALTIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDTLSVSFTFALQTNHQISYKVERVFKRTDEMKVKTALCRFIEIKEEHTV
LADKASEVNKRVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNLEQYGD
RLVKKLRRQAQEANARKNEMLAEQSGLGEAGSEAVEQAEQALEQAEARLEAMRKNRDQAK
ERFTEHQEIWNVQKEKAAYDEEKKRLEEEQPHVDSMQKRLLEAETAAALKPYADRYAEAI
RHEEKAEKEQTLAQKELADRTAFFHQKHEEYEAWRRHKSEKEPELLTEQEQLSRLQEIEI
KLSEAKREEEGKKAELQQKEEALQSVMNELEAVTDRLARGQSRQTELKQQLKSLQVTSDE
RKSCQQAAEMALRIRQTEEQITKERKRSDALNLVLQKMNEEKSILVQKTETEENNIIQAY
EAVQTVYHMVCETERSLTRMTEQAKKRQQTLHSQREKARVALLTKELAEKLTAGKPCPVC
GSTHHDPSASVHETYEFDSSLEDNIKQTDVLLTEAAALSQEILSAKITLEEQSARFIEQC
PFLQKIQQAPNLEAAASYENQPGHDAFDAAKIEWKRVKQDILSVKTRMAQMISAYQESLK
KADQLNEKIGFEKREADRIESIIAELQSSLDSRLKMFNEAFQDQSVNEAEKWQQAIEEKD
RAAEDCEKRIEKSIAFLAEHESQKEKLRESGHQLEREKLELHYAAERIKSAIADYEHELG
DYAKGDSIQIKLRSVQQDLKLLKEKEQSLYEELQRAQMKLNQAKSRASASELTLQEAKDR
LEKAESDWLGHAKSTRFTRTEEVERSLIPADELEKIKAGIDQFVDKLKQNAANLMRVEER
LAGRALSESEWSDTVRALQEAEDAFGAAIEEKGAAAKALAVIREHHKRFNEIEAELKKWQ
THIDRLDKLQAVFKGNTFVEFLAEEQLESVARDASARLGMLTRQRYAIEVDSEGGFVMRD
DANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDT
VVTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPAEPSGRGTRVSLELM
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattgccttaacgataaaggggctccacagctttagagaggagcagacaata
gattttgaaggcctttccggtgcaggtgttttcggcattttcggcccgacaggaagcggc
aaatcttctatcctcgacgcgatgacgcttgctttatacggaaaggtggagcgggcggca
aacaatacgcacggtatcttaaatcatgcggaagatacgctgtctgtttcctttaccttt
gcgcttcagacgaatcatcaaatctcttacaaagtcgagcgcgtgtttaagagaacggat
gaaatgaaggtgaaaacggcactttgccgcttcatcgagatcaaggaagagcatacggtg
ctggctgataaagccagcgaagtaaataaaagagtggaagagcttttggggctgacgatc
gatgattttacgagagcggtggtcctgccgcaaggaaaatttgccgaatttctgtcttta
aaaggggcggagcgcagacatatgcttcagcgattatttaatttggagcagtatggagac
cggcttgtgaaaaaactgagacggcaggcgcaggaagccaatgcgagaaaaaatgaaatg
cttgctgaacagtcgggtctcggcgaggcgggttcagaagcggttgagcaggcggaacag
gctctcgaacaagctgaagcccggctggaagcgatgaggaagaatcgtgatcaggcaaaa
gagcggtttaccgagcatcaggaaatttggaatgtccaaaaggaaaaagccgcttatgat
gaagagaaaaaacgtctcgaagaggaacagccgcacgtagacagcatgcaaaagcgcctg
ctggaagctgaaactgccgctgctctgaaaccctatgcggatcggtacgcagaagcgatc
cggcatgaggagaaagctgaaaaggaacaaacgcttgctcaaaaggagttagcggaccgg
actgctttctttcatcaaaaacatgaggagtatgaagcgtggcgacggcataaaagcgaa
aaagaacctgagcttttaaccgaacaggaacagctttcccgcctgcaggagattgagatc
aaactgagtgaggccaagcgagaggaagaaggcaaaaaggctgaactccagcagaaagaa
gaggctcttcaatctgtcatgaatgaattggaggctgtaacagaccgtctggcgcgggga
caaagcaggcagacggaattgaagcagcagctcaaatctttgcaagtgacatccgatgag
cgaaaaagctgccagcaggccgcagaaatggcattgcgcatcaggcagactgaggagcaa
atcacaaaagagcgaaaacgaagtgacgcattgaacctcgtgcttcagaagatgaatgag
gagaagagtatactcgttcaaaagacggaaacggaagaaaacaatatcattcaggcgtat
gaggctgtacaaaccgtgtaccatatggtgtgcgagacggaacgttcattaacacgcatg
actgagcaggctaaaaaaagacagcaaacgcttcactcgcagcgcgaaaaagcaagggtg
gcactgctgacaaaagagttagctgaaaagctgacagccggaaagccttgtccagtctgc
ggttcaacccatcatgatccgtctgcctcagtacatgaaacatatgagttcgacagcagc
cttgaagacaacatcaaacagacagatgtgttgctgacggaagcggcagctctcagccag
gagattctttctgccaaaatcacgcttgaagaacaatccgcgcggtttattgaacagtgt
ccgtttttgcaaaagattcaacaagcaccgaaccttgaagcggcagcttcttacgagaat
cagccggggcatgacgcattcgatgctgccaaaattgaatggaaacgagtcaagcaggat
attctttctgtcaaaacacggatggcacaaatgatcagcgcctatcaggagtctttaaaa
aaagccgatcagcttaatgaaaaaatcggttttgaaaaaagagaggcggaccgtatcgaa
agcatcatcgctgagcttcagtcctcgttggacagccgtctgaaaatgtttaatgaagcg
tttcaggatcaatctgtgaatgaagcggaaaaatggcagcaagccattgaagaaaaggac
cgggctgcagaagattgcgaaaaacgaattgagaagagcatcgcatttcttgctgagcat
gaatcgcaaaaggaaaagctgcgggaatctggacaccagcttgaacgggaaaagctggag
cttcattatgcggctgaacgcatcaagagcgcgatagctgattatgagcacgaactcgga
gattacgcaaaaggagattcgatccaaatcaaactccgctctgtccagcaagatctaaag
ctgttaaaggaaaaagagcaatctctatatgaagaactgcaacgcgcccaaatgaagctc
aatcaggcgaaaagccgcgcttcagcaagcgagctgactcttcaagaggcgaaggacaga
ttggaaaaagccgaatccgattggcttgggcatgcgaaaagcactcgctttacccggact
gaagaggtggagagaagtctcattccagccgatgagcttgaaaagataaaagcgggcata
gaccagtttgtggataaactgaagcaaaatgccgcaaacttaatgcgtgtagaagagaga
cttgccggccgagccttatcagagagcgaatggagcgataccgttagggcattacaagaa
gctgaggacgcatttggcgctgcgatagaggaaaaaggcgcggcagcgaaagcgctggcc
gttattcgcgaacatcataaacggtttaacgaaattgaggctgagctgaaaaaatggcag
acgcatatcgacaggctggacaagctgcaagccgtgtttaaagggaacaccttcgtcgaa
tttttagctgaggagcagcttgaaagcgttgcgcgggacgcgtcagcaagacttggcatg
ctgacgagacagcgctatgccatcgaagtggattcagaaggcggattcgtgatgcgcgat
gacgcaaatggaggcgtcaaacggccggtatccagcttgtctggaggagagaccttcctc
acctcgctttctctcgctcttgcgctgtctgcgcagatccagcttcgcggagaatacccg
ctccagttctttttcttagatgaagggttcggcaccctggatcaagatctgcttgataca
gttgtgacagccttggaaaaactgcaatcagacaatctgtctgtcggtgtcatcagccat
gtgcaggaactgcgggcccggcttccgaaaaagctgatcgtccatccggctgaaccgagc
ggacgcggcacacgggtgtcacttgaattgatgtaa
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