Bacillus cabrialesii: EFK13_09065
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Entry
EFK13_09065 CDS
T08101
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-28 factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
bcab
Bacillus cabrialesii
Pathway
bcab02020
Two-component system
bcab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EFK13_09065 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EFK13_09065 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcab03021
]
EFK13_09065 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bcab02035
]
EFK13_09065 (sigD)
Transcription machinery [BR:
bcab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EFK13_09065 (sigD)
Bacterial motility proteins [BR:
bcab02035
]
Flagellar system
Flagellar assembly proteins
Stator
EFK13_09065 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
IF2_N
UPF0175
DUF7096
Motif
Other DBs
NCBI-ProteinID:
UQE80704
LinkDB
All DBs
Position
1746902..1747666
Genome browser
AA seq
254 aa
AA seq
DB search
MQSLNYEDQVLWTRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVSPAEIAEELGMTVQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAEKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKNLLEKVIQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattatgaagatcaggtgctttggacgcgctggaaagagtggaaagat
cctaaagccggtgatgatttaatgcgccgttacatgccgcttgtcacatatcatgtaggc
agaatttctgtcggactgccgaaatcagtgcataaagacgatcttatgagccttggtatg
cttggtttatatgatgcccttgaaaaatttgaccccagccgggacttaaaatttgatacc
tacgcctcgtttagaattcgcggcgcaatcatagacgggcttcgtaaagaagattggctg
cccagaacttcacgtgaaaaaacaaagaaggttgaagcggcaattgaaaagcttgagcag
cgctatcttcggaacgtatcgcccgcagaaattgcagaggaactcggaatgacggtacag
gatgtagtgtcaacaatgaatgaaggtttttttgcaaatctgctgtcaattgatgaaaag
cttcatgatcaagatgacggtgaaaacattcaggtcatgatcagagatgacaaaaatgtt
ccgcctgaagaaaagattatgaaggatgaactgattgcacagcttgctgaaaaaattcat
gaactctctgaaaaagaacagttggtggtcagtttgttctacaaagaggagctgacattg
acagaaatcggacaagtattaaatctttctacgtcccgcatatcacagatccattcaaag
gcactatttaaattaaagaatctgctggaaaaagtgattcaataa
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