Bacillus cabrialesii: EFK13_09120
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Entry
EFK13_09120 CDS
T08101
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bcab
Bacillus cabrialesii
Pathway
bcab03030
DNA replication
bcab03430
Mismatch repair
bcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFK13_09120
03430 Mismatch repair
EFK13_09120
03440 Homologous recombination
EFK13_09120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcab03032
]
EFK13_09120
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_09120
Enzymes [BR:
bcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFK13_09120
DNA replication proteins [BR:
bcab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFK13_09120
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFK13_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn-ribbon_8
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
UQE80715
LinkDB
All DBs
Position
1757539..1761852
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQINMTDDTFMTYFEDGEIKKLTIHKASKSWHFHFQFKSLLPFQI
YDTLTMRLTQAFAHIAKVTSSVEVQDAEFSESLVQDYWSRCIEELQGISPPIISLLNQQK
PKLKGNKLIVKTKTDTEAAALKNKYSSMIQAGYRQFGFPDLQLDAEIFVSEQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQVPSGPLVIGYQIKDNEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYNAAHRLLEEET
YVVFDVETTGLSAVYDTIIELAAVKVKDGEIIDKFEAFANPHRPLSATIIELTGITDDML
RDAPDVVDVIREFREWIGDDILVAHNASFDMGFLNVAYKKLLEVEKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM
GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDVASFYDYLEVQPPEVYRHLLELELVRDEKSLKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILVSSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVANTQKVASLIDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
QLPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYVCSECQHSEFFNDGSVGSGFDLPDKICPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDHNLH
MRGAEVDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLMPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIKAVMED
INSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSAAEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaagatggcgagattaaaaagctgacgatacac
aaagcgtctaagtcttggcattttcattttcaatttaaatctttgctgccttttcaaata
tatgacaccttaacaatgaggctgacacaagcgtttgcccacatagcaaaagttacatct
tcagttgaagtgcaggatgccgagttcagtgagagtcttgttcaagactactggtcacgc
tgcattgaagaattgcaaggcatttcgccgccgattatcagtcttttaaaccagcaaaaa
ccgaagctgaaaggcaataaactgattgtcaaaacaaaaacggacacggaagccgctgct
cttaagaacaaatacagttccatgattcaagcaggctaccgtcaatttggttttccggac
cttcagcttgatgccgaaatatttgtatcagagcaagaagttcaaaagttcagggagcaa
aagcttgcagaagaccaggagcgggctatgcaggcgctgattgaaatggagaagaaagac
aaagaaagtgatgaagaccaagtgccttctgggcctcttgtcatcggttatcaaattaaa
gataatgaagaaatccggacgcttgacagcatcatggacgaagaacggagaattacggtc
cagggttacgtgtttgatgtggagacccgagagctaaaaagcggacgcacactgtgcatc
ttcaaaattacagactatacaaatagtattttaatcaaaatgtttgcacgtgaaaaagaa
gatgcggcactgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcatt
cagaatgacactttcgtcagagatctcgtcatgatcgcaaatgacgttaacgaaataaaa
gcaaaaacccgtgaagattcggctcctgaaggagaaaaaagagtggaattgcatctgcat
tctccaatgagccaaatggatgctgttacagggattggaaagcttgtcgaacaagcgaaa
aaatgggggcatgaggccatcgctttgactgaccatgctgtcgttcaatctttccctgat
gcgtattctgccgctaaaaagcatggaattaaaatgatttacgggatggaagcaaatctc
gttgatgatggcgtgccaattgcttataacgctgcacatcgtctgcttgaggaagaaaca
tatgttgtttttgacgtcgagacaacaggcttgtctgctgtttacgacaccattattgag
ctggctgcagtaaaagtaaaagacggagaaattattgataaatttgaggcgtttgcgaac
ccgcatcgtccgctttcagccacaatcatagagctgacgggcattaccgatgatatgctt
cgcgatgctccggatgttgtagatgtgataagagaatttagagaatggatcggcgatgat
atccttgtcgctcataatgcgagctttgacatgggattcctaaacgtggcttataaaaag
cttcttgaagtcgaaaaagctaaaaacccagtcattgatacgcttgagctcggccgtttt
ctctatcctgaatttaagaaccaccgtctgaacacgctttgtaaaaagtttgatatcgaa
ctcacacagcaccaccgtgcgatttatgatactgaggcgactgcttatttacttctgaaa
atgctgaaggatgcagctgaaaaaggcattcagtatcatgacgagctgaatgaaaatatg
ggtcagtccaacgcttatcaaagatcaagaccgtatcatgcaacattacttgctgtgaac
agcacggggcttaaaaatttatttaagcttgtgtcactttcccatattcattatttttac
agagtgcctcgtatcccgagatctcagcttgagaaatacagggaagggcttctgatcggt
tcagcctgtgacaggggagaggtatttgaagggatgatgcaaaaatcgcctgaagaggtt
gaagatgtcgcgtcattctatgattatcttgaggttcagccgcctgaagtgtaccgtcac
ttgctagagcttgaactggtacgcgatgaaaaatcgctgaaagaaattattgcgaatatc
acgaagctgggtgaaaagctaaacaaaccggttgttgctacgggaaatgttcattacttg
aatgatgaggataaaatctacagaaagattctagtatcctcacagggcggagccaatccg
ctgaacaggcatgaacttccgaaagtgcatttcagaacgacagatgaaatgcttgaagca
ttttctttcttaggcgaagaaaaagcgaaggaaattgttgttgccaatacccaaaaggtt
gcttctttaatcgatgacatcaagccgattaaagatgatttgtatacaccgaaaatcgaa
ggcgccgatgaagagatcagagaaatgagctaccagcgtgcaagaagcatttacggcgaa
cagctgcctgaaattgtcgaagcgcggattgaaaaggaattaaagagtatcattggccac
ggcttcgctgttatttatttgatctctcacaaacttgtaaaacgttcactggatgacgga
tatctcgtaggttcccgtggttccgtaggatcttcactagttgcgacgcttactgagatc
actgaggtaaacccgctgccgccgcactatgtatgctctgagtgccagcattctgagttc
tttaatgacggttctgtcggttccggttttgacctgcctgacaagatatgtcctcattgc
ggaacgcctttgaaaaaagacggccatgatattccgtttgaaacgttcttaggatttaaa
ggggacaaagtgccagatatcgacttgaacttctcaggggaatatcagccgcaagcccac
aattacacaaaagtattgtttggagaagacaatgtatatcgtgcgggaacaataggcaca
gttgcagaaaaaacggcctacggttatgtgaaaggctatgccggagatcataatcttcat
atgcgcggggctgaagtagatcggctcgtacagggatgtacaggtgtaaaacgtacgact
ggacagcaccccggcggtattatcgtagtaccggattatatggatatttatgatttttca
ccaattcagttcccggcagatgccacaggttcagagtggaaaacgacacattttgatttc
cactccatccatgacaacctgttaaaactggatattctcggacacgatgacccgaccgtc
attcggatgcttcaagacttaagcggaattgatccgaaaacaattccaactgatgatcct
gaagtgatgaagatcttccagggaaccgaatcactcggtgttacagaagaacagatcggc
tgtaaaacgggaactctcggaatccctgaattcggaacccgatttgtccggcaaatgctt
gaagatacaaagccgacaactttttccgagctcgttcagatttcaggcttgtctcacgga
actgatgtatggctcggcaatgcgcaggaactcatccacaataatatttgtgagctgagt
gaagttatcggctgccgtgatgacattatggtttatttaatctatcaaggccttgagccg
tcccttgcctttaaaatcatggaatttgtgcgtaaaggaaaaggattgatgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtatattgattcttgtaaaaagatt
aaatacatgttcccgaaagcccacgccgcggcgtatgtattaatggcagtccgtatcgct
tactttaaagtgcatcacgcgcttctgtattatgcggcttattttaccgttcgtgcagac
gattttgatatcgatacaatgatcaagggttctacagcaatcaaggctgtgatggaggat
attaactctaaaggacttgatgcttcgccaaaggaaaaaaaccttctgactgttttagaa
ttagcgcttgaaatgtgtgaaaggggctattcattccaaaaagtcgatttatatcgttcc
agcgctgcagagtttattattgacggcaacagtcttattccgccgtttaactccattcct
ggattagggacgaacgccgctctaaacattgtaaaggctcgtgaggaaggcgagttcctc
tcaaaagaagatttgcaaaagagagggaaagtgtcaaaaacgattttagagtatttagat
cgtcatggctgtctcgaatcactgcctgatcaaaaccaattgtcactgttctaa
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integrated database retrieval system
