Bacillus cabrialesii: EFK13_11685
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Entry
EFK13_11685 CDS
T08101
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcab
Bacillus cabrialesii
Pathway
bcab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFK13_11685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcab03019
]
EFK13_11685
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_11685
Enzymes [BR:
bcab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFK13_11685
Messenger RNA biogenesis [BR:
bcab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFK13_11685
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFK13_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
DUF6119
Motif
Other DBs
NCBI-ProteinID:
UQE77457
LinkDB
All DBs
Position
complement(2324482..2325972)
Genome browser
AA seq
496 aa
AA seq
DB search
MTKLQQTLQHFFGFTSFKKGQEDIIRSILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLSRQERQFVLEHIHRYKFLYLSPEALQSPY
VLEKLKAVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKQLEHPPVLALTATATKDTLQ
DVMNLLELQHAERHLNSVNRPNIALRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKW
AEELAGEIKNKTSSRADFYHGGMESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRY
VIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAEEIANVIR
VLEKTDDRDERRLRDVLMQYGVGETQARMMIHLFMQGKTSIELMKREISYRMELKMEKMR
RVSFLLQRDGCLRESLLTYFDESYEPDDGNLPCCSQCGFDLSLYEQKGERSKMAPLDSWS
SELHRIFSMQTVGELN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattacagcaaacgctacaacatttttttggttttacttcctttaaaaaaggg
caggaggacattatcagaagcattctcagcgggaaggataccattgcgatgctgccgact
gggggaggaaaatcgctttgctaccagctgcctggatatatgcttgacggcatggtatta
atcgtttctccattgctttctttaatggaagatcaggtacagcagctaaaagcacggggg
gaaaagcgtgcggccgctttgaacagcatgctaagcaggcaggagagacaattcgttttg
gagcatattcatcgctataaatttttatacttgtcccctgaggctttgcagtcgccatat
gtattggaaaaattgaaagcagtccccatcagcctattcgttattgatgaagcacattgt
atatcagaatgggggcatgacttcaggcctgactattcaaagctcggacagctgagaaaa
caacttgagcaccctccggttctggcattgaccgctacagcaacaaaggatacgctgcaa
gatgtcatgaacctgctggagctgcagcatgccgaacgtcatctcaactcagtcaaccgt
ccaaacatcgcacttagggttgaaaatgcggcggatacggccgaaaaaatagatagggtt
attcagctggttgaaaacctgcaagggccgggaattgtttattgcccgacacggaaatgg
gctgaggaattagcgggtgaaattaaaaacaaaacgagcagcagagccgacttttaccat
ggcggtatggagtctggcgacaggattttaattcagcagcagtttattcataaccagctt
gatgtcatatgttgtacgaatgcgtttggaatgggtgtcgataaacctgatatcagatat
gtgattcattttcacctcccgcagacggctgaagcttttatgcaggaaattggcagagca
gggcgcgacggaaaaccgagcgtcagcattttgctgcgggcaccaggggattttgaactg
caggagcagattatccaaatggagagtgtcacagctgaagaaatcgccaatgtgatccgt
gtgcttgaaaagacggatgatcgggatgagagaaggcttcgtgacgtattaatgcagtat
ggtgtcggagaaacgcaagcgcgtatgatgattcacctctttatgcagggcaaaacatca
attgaattgatgaagcgggagatttcctatcggatggagctgaagatggaaaaaatgcgc
cgcgtatcttttctgcttcagcgtgacggctgtttaagggaatcgctgctaacctatttt
gatgaatcatacgagcctgatgacggaaatctcccgtgctgttcacaatgcggttttgat
ctatccttgtatgaacaaaaaggagaacggagtaaaatggcgccattagacagctggagt
tcggaattgcaccgcatattcagcatgcagactgtaggtgagctgaactga
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