Bacillus cabrialesii: EFK13_14020
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Entry
EFK13_14020 CDS
T08101
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcab
Bacillus cabrialesii
Pathway
bcab03410
Base excision repair
bcab03430
Mismatch repair
bcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFK13_14020 (recJ)
03430 Mismatch repair
EFK13_14020 (recJ)
03440 Homologous recombination
EFK13_14020 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_14020 (recJ)
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EFK13_14020 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EFK13_14020 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EFK13_14020 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
tRNA_anti-codon
PGM_PMM_II
SSB
Mannosidase_ig
Motif
Other DBs
NCBI-ProteinID:
UQE77873
LinkDB
All DBs
Position
complement(2731967..2734327)
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESAKLFLHTKDADFYDP
FEMKGMREAAERIKQAISQQEQIMIYGDYDADGVTSTSVMLHTLQKLSAQVDFYIPDRFK
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEANVAKELGLDVIITDHHEPGPELPDVH
AIVHPKQPGCTYPFKELAGVGVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLI
ATLGLERLRRTNRLGLKELIKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLM
SEDLFEAEELAAEIDQLNKERQKMVSKMTDEAIDMVEQQGLDQTAIVVAKAGWNPGVVGI
VASKLVDRFYRPAIVLGIDEEKGIAKGSARSIRGFNLFESLSECRDILPHFGGHPMAAGM
TLNAEDVPDLRNRLNEIADNTLTEEDFIPVQEIDLVCGVEDITVESITEMNLLSPFGMLN
PKPHVLVENAVLEDVRKIGANKNHVKMTVRNESSQLDCVGFHKGELEESIVPGSRISIVG
EMSINEWNNRKKPQLMIKDAAVSEWQLFDLRGKRMWENTVSALPAAKRAIVSFKEDSTTV
LQAEELRREVHVISSEEQAKALDLNGAYIVLLDPPPSLDMLARLLEGKAPERIYFIFLNQ
EDHFLSTFPARDHFKWYYAFLLKRGTFDVKKHGSELARHKGWSVETINFMTKVFFDLGFV
KIENGVLSVVSGVKKRDLTDSQTYQAKQQLMELDQKLNYSSAEELKEWLNKLMKQDSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgatgggaaatccagcgaccagatcaggataaggtcaaatca
ctcacagaacaattgcatataacacctcttgttgcgtccctgcttgtaaaaagaggcttt
gatacggcagaaagcgcaaagctgtttttacatacaaaggatgccgatttttatgaccct
tttgaaatgaagggcatgagagaagcggcagagcgaataaaacaggcgatttcacaacaa
gaacagattatgatatatggcgattatgacgccgatggagttaccagtacgtcagtgatg
ctgcacacgctgcaaaagctgtcggctcaagttgatttttatatacctgaccgctttaaa
gaaggatatggccctaatgaacaggcgtttcgttcaattaaagaacgaggtttctctctg
attattacggttgatacaggaattgccgctgtgcatgaagcgaatgtggcaaaggaactc
ggacttgatgtcatcattaccgatcaccatgagccgggaccggagcttccggatgtccac
gcgatcgtccacccgaagcagccgggctgcacctacccgtttaaagaactggccggggtc
ggcgtcgcgtttaagcttgcccatgctttactgggcgaactcccggatgaactgcttgac
ctggcggcaatcggcaccattgccgatcttgtcccgttgcatgacgaaaacagattaatc
gcaacactgggacttgaaaggcttcggcggacgaatcggctgggcttaaaagagctgatc
aagctgtcaggcggagatatcggagaagcgaacgaagaaacagtcgggttccagttggca
ccaaggctgaatgccgtcggaagaattgaacaggctgatcctgctgttcatttgctcatg
tcagaggatttgtttgaagcggaagagcttgccgctgaaattgaccagctgaacaaagag
cgccaaaagatggtcagcaaaatgacggatgaagcgattgatatggttgaacagcaaggt
ctcgatcaaactgcaatcgtcgtggccaaagccggatggaatccaggagtcgtcgggatt
gtggcttcaaagcttgtggaccgtttctaccgcccggccattgtgcttggcattgatgaa
gaaaaagggatcgctaaaggctcggccagaagcatcaggggctttaatttattcgaaagc
ctttctgaatgcagagatattcttcctcatttcggcggccatccaatggcggcgggaatg
acgctaaatgccgaagatgtgccggatttgcgaaacaggctgaatgaaatagcggacaac
acgcttacggaagaggattttattcctgtacaggaaatcgatctcgtctgcggcgtcgag
gacattacggttgagagcatcacagagatgaatctgctgtctccatttggcatgctgaac
ccgaaaccgcacgttctcgtagaaaatgctgtgctggaagatgtccgcaagatcggagct
aataaaaatcatgtcaaaatgacggtcagaaacgagtcttctcagcttgattgcgtgggg
tttcataaaggcgagcttgaagaaagcatcgtcccgggttcaagaatatcaattgtcggt
gagatgtcaatcaacgaatggaacaatagaaaaaaaccgcagctaatgattaaggatgcc
gctgtttctgaatggcagctgtttgatttaaggggaaaacggatgtgggaaaacacagtt
tccgctctaccagctgctaaacgggccattgtctctttcaaagaagactcaacaacagtt
cttcaggctgaagaacttcgccgtgaagtgcacgtcatcagctctgaagaacaagcgaag
gcgttagaccttaatggcgcatatattgtattgctggatccgccgccttcgttggacatg
ctcgcacgtttgctggaaggcaaggcgcctgagcggatatatttcatttttctcaatcaa
gaggatcactttttatcaacatttcccgcaagagaccacttcaaatggtattatgcgttc
ttgctgaaaagaggcacttttgacgtaaaaaaacacggttcagagcttgcaagacataaa
ggctggtccgtggaaacaatcaatttcatgacaaaggtgttttttgatctaggttttgtt
aaaatagagaatggtgtgctgtctgtggttagcggagtaaagaaacgcgacttaacagac
tcacaaacatatcaagcgaaacagcagctgatggaactggatcaaaagctgaattattct
tctgctgaagagctgaaggaatggctgaataagctgatgaaacaagattcagaggcttat
gaaagtacgaggaggacataa
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integrated database retrieval system
