Bacillus cabrialesii: EFK13_14790
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Entry
EFK13_14790 CDS
T08101
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcab
Bacillus cabrialesii
Pathway
bcab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFK13_14790 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_14790 (mutM)
Enzymes [BR:
bcab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EFK13_14790 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EFK13_14790 (mutM)
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EFK13_14790 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Mrpl_C
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
UQE78013
LinkDB
All DBs
Position
complement(2883320..2884153)
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AA seq
277 aa
AA seq
DB search
MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK
FLLFHLDHYVMVSHLRMEGKYGLHQAKEPDDKHVHVIFTMTDGTQLRYRDVRKFGTMHLF
NPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVVGLGNIYVDEA
LFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQHF
VYGKKDQPCKNCGTMISKIVVGGRGTHFCAKCQKKSR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattaccagaggttgaaacggtccggcgcactctgaccgggcttgtaaaggga
aaaacaatcaaatcggtagagatcagatggccgaatatcatcaaacggcctgccgaaccg
gaggaatttgcgcgaaatctagcaggagaaacgatacagtctatcggaagacggggaaag
tttttgctgtttcatttagatcattatgttatggtttcccacctgcgaatggaagggaaa
tacgggcttcatcaagcgaaggagccagacgataaacacgtgcatgtcatattcacgatg
acagatggaacccagcttcgttacagggatgtgcggaagtttggaaccatgcacttattt
aatccgggagaggaagcgggcgagctccctctttctcaattagggccggagccggatgca
gaagaatttacgagtgcgtatttaaaagaccggcttgccaaaacaaaccgtgcagtcaaa
accgccctgctggatcaaaaaacagttgtcggactcgggaacatttatgtggacgaggct
cttttcagagcgggtgtccatcctgaaacaaaagcaaatcaattatcagacaagacaatc
aaaacacttcacgctgaaatcaaaaacaccttgcaggaagcgatagacgcgggcggcagc
actgttcgctcgtatatcaactcccaaggagaaatcggaatgttccagcttcagcatttt
gtatacggaaaaaaagaccagccgtgcaaaaattgcggaacgatgatttcaaaaatcgtc
gttggaggcaggggcacgcatttttgcgccaagtgccagaaaaaaagcagataa
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