Bacillus cabrialesii: EFK13_14865
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Entry
EFK13_14865 CDS
T08101
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcab
Bacillus cabrialesii
Pathway
bcab03030
DNA replication
bcab03430
Mismatch repair
bcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFK13_14865 (dnaE)
03430 Mismatch repair
EFK13_14865 (dnaE)
03440 Homologous recombination
EFK13_14865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcab03032
]
EFK13_14865 (dnaE)
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_14865 (dnaE)
Enzymes [BR:
bcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFK13_14865 (dnaE)
DNA replication proteins [BR:
bcab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFK13_14865 (dnaE)
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFK13_14865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DUF3860-like
Motif
Other DBs
NCBI-ProteinID:
UQE78028
LinkDB
All DBs
Position
complement(2902265..2905612)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAAAVEELVKEADRLGYASLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASIFTDDNELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREG
IIALTPGEKGYIEMLLEGGLFEQASQAALEFQSIFGKGAFYFSYQPFKGDQALSEQILRL
SEETDIPVAATGDVHYIRKEDKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLEEMQNIY
REHPEALQASVEIAEQCRVDVSLGQTRLPSFPTPDGTSADDYLTDICMAGLRSRFGTPDE
RYLRRLQYELDVIKRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQQKYGEMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLDEARKQSPQLDKRLRESSLLQQVYTIAR
KIEGLPRHASTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEENIKIDLSSISYRDDKTFSLLSKGDTTGIFQLESSGMRSVLKRLK
PSGLEDIVAVNALYRPGPMEHIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIM
MIASRMAGFSLGEADLLRRAVSKKKKEILDKERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKIAQYLYEAKGSGIRI
LPPSVNKSSFPFTVEDGSVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKTLEALIFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLDESYSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAYRKQLAAHGAASILQARQAVKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEVRQDK
VQFILSRAELLENMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYEKQK
QTIKLPESFHIDADYQVLYRLKELLGQKNVVLKQW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcacctgcaagtgcatagcgggtacagcctgctaaacagcgccgcggct
gtggaagagctcgtcaaggaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcatgcaaggccagagggatcaac
ccgataatcggtttgacagcttctatttttacagatgataacgagcttgaagcctacccg
ctcgtcctgctggccaaatcaaatacaggctatcaaaacctgctgaaaatcagcagcgtt
ctgcaatcgaaatcaaaaggcgggctaaagccgaagtggcttcacagttatcgtgaaggc
attatcgcgttgacgcccggcgaaaaaggatatattgaaatgcttcttgaaggagggctg
tttgaacaggcctctcaagccgcgcttgaatttcagtctatattcggcaagggagctttt
tatttttcctatcagccttttaaaggggatcaagccttgtcagagcagattctgcggctg
tctgaagaaacggatatccctgttgcggcgacaggcgatgtgcattacataaggaaagaa
gataaggccgcctaccgctgtctgaaagcgattaaagcaggtgaaaaactgacggatgca
cccgccgaagatctgcctgatctcgatttgaaaccactcgaagaaatgcaaaacatttat
cgagagcatcccgaggcgctgcaagcttctgttgagatcgcggaacaatgccgggttgac
gtcagcctcgggcagacccgtctcccatcttttccgactccagacggaacgtccgctgat
gattatttaacggacatctgtatggcaggactccgcagccgctttggcacgcctgatgaa
cgatatcttcgccgtcttcaatatgagcttgatgtcatcaagcggatgaagttcagcgat
tactttctgatcgtatgggattttatgaagtacgctcatgaaaaagggattgtgacaggg
ccgggaaggggttctgcggcaggttctcttgtggcatatgtgctgtatattacagatgtt
gatccgatcaaacatcatctgctgtttgaacgatttttaaatcccgaacgcatcagcatg
ccggatattgatattgattttccggatacaagaagggatgaagtcattcaatacgttcag
cagaaatacggtgagatgcacgtcgcgcagattatcacctttggaacacttgcggcaaaa
gcggcgcttcgggacgtcggcagggtattcggcgtcagcccgaaggaagcagatcagctt
gcaaaactcattccttcaaggccgggcatgacgctggatgaagcgagaaagcagtcgccg
cagctggataagcggcttcgggagtcaagcctgcttcagcaagtctatacaattgcccga
aaaatagaagggctgccaaggcatgcatcaacccacgcagcaggcgttgttctgagtgaa
gaaccgttaacggatgttgtccctcttcaggaagggcatgaagggatatatttgacgcaa
tacgcgatggatcatcttgaagacttgggccttctaaaaatggatttcttaggcttgcgc
aatctgacgctgattgagtccatcacttcaatgatcgaaaaagaagaaaacatcaaaata
gatctttcaagtatttcctatcgtgatgacaaaacgttctccctgctgtcaaaaggagat
acgacagggattttccagcttgaatcttcagggatgagaagtgttctgaagcggcttaag
ccttcaggcctggaggatattgtggcggtcaatgcgctgtaccggcctggcccgatggaa
catattccgttatttatcgaccgtaaacacggccgggcgcctgttcactatcctcacgaa
gatttaaggagcattttggaagatacatatggcgtcatagtgtatcaggaacaaattatg
atgattgcttcccgtatggcgggattttctttaggcgaagcggacctgctgagacgggcg
gtcagcaaaaagaaaaaagaaatcttggacaaagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaagtctacgatttaatcgtcaaattc
gcaaactatggctttaaccgaagccatgcggtggcatacagcatgatcggctgccagctt
gcgtatttgaaagctcattatccgttgtattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatagctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaacaaaagcagttttccgtttacagttgaagacggatctgtcaga
tacagcctccgcgcgatcaaaagtgtaggcgtctcagcagtcaaagatatatataaagcg
agaaaagagaaaccatttgaagatcttttcgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaaacgcttgaagcacttatcttttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgacgttgctttggaacacgctgagctattcgcc
gcggacgatgaccaaatgggattgtttttagatgaatcgtattcgattaagccgaagtat
gtggagacagaagagcttccgcttgtggatttacttgcgtttgaaaaagaaacgcttggc
atttatttttcaaatcatccgctttctgcctacagaaaacagctggctgcgcacggagca
gcgtccattttgcaggcccggcaggctgtcaaaaggcagctttctctcggagtcctgctg
tcgaagatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gacgaaaccggcgaaatggaagccgtagtcttccctgaacaattcagacagctttctccc
gttttaagagaaggcgctcttttgttcacagcggggaaatgtgaagtaagacaggataag
gtccagttcatcttgtcccgggcagagttattagaaaatatggatgcggaaaaagcgccg
tcggtttatataaaaatagaaagcagtcagcacagtcaggagatcctggcaaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaagcaaaaa
cagacgattaagcttcctgagtcgtttcatatcgatgcggattaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa
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