Bacillus cabrialesii: EFK13_20965
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Entry
EFK13_20965 CDS
T08101
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bcab
Bacillus cabrialesii
Pathway
bcab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFK13_20965 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcab03400
]
EFK13_20965 (xth)
Enzymes [BR:
bcab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EFK13_20965 (xth)
DNA repair and recombination proteins [BR:
bcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EFK13_20965 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UQE79111
LinkDB
All DBs
Position
complement(4107425..4108183)
Genome browser
AA seq
252 aa
AA seq
DB search
MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQPDGYHVYWNYAVK
KGYSGTAVFSKQEPLRVMYGIGIEEHDQEGRVITLEFDNMFVMTVYTPNSKRGLERIDYR
MQWEEALLAYILELDKKKPVVLCGDLNVAHQEIDLKNPKANRKNAGFSDQERGAFTRFLE
AGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFIVSEGLKEQIEDAGISADVMG
SDHCPVELIINI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatttcttggaatgtaaacggcctgcgggctgtcatgagaaagatggatttc
ctttcttatctaaaggaagaggatgcagatatcatttgtcttcaggaaacaaaaatacag
gacggccaggttgatctccagcctgacggctatcatgtgtattggaattatgcagtgaaa
aaaggatattccggcacggctgttttttcaaaacaagagccgctgcgtgtcatgtacggt
atcggaatagaagagcatgaccaagaaggcagagtgattacgctggaatttgacaacatg
tttgtgatgaccgtttacacgcccaattcgaaaagaggattggagcggatcgattaccgc
atgcaatgggaagaggctttattagcttatattcttgaattggataagaaaaagccggtc
gttttatgcggcgatttgaatgtggcacatcaggagatcgatttgaaaaatccaaaggca
aaccggaagaacgctggattttctgatcaagaaagaggggcattcactcgtttcttagaa
gctggctttgttgactcattccgccacgtctatcctgatcttgaaggcgcttattcctgg
tggtcttatcgtgccggcgcccgggacagaaacatcggatggcgtatcgattattttatc
gtttccgaagggcttaaggaacagattgaggatgcaggcatatcagcggatgtcatgggt
tccgaccattgtcctgttgaacttataatcaatatatga
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