Bacteroides caccae: CGC64_00285
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Entry
CGC64_00285 CDS
T05064
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03030
DNA replication
bcac03430
Mismatch repair
bcac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC64_00285
03430 Mismatch repair
CGC64_00285
03440 Homologous recombination
CGC64_00285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcac03032
]
CGC64_00285
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_00285
Enzymes [BR:
bcac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC64_00285
DNA replication proteins [BR:
bcac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC64_00285
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC64_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ASM64575
LinkDB
All DBs
Position
complement(60065..63871)
Genome browser
AA seq
1268 aa
AA seq
DB search
MQDFVHLHVHTQYSLLDGQASVARLVDKAMQNGMKGIAVTDHGNMFGIKEFTNYVNKKNS
GPKGEIKDLKKRLVGIEAGSIECEDKEAEVAACKAKIVEAENKLFKPIIGCEMYVARRTM
DLKEGKQDQSGYHLIVLAKNETGYHNLIKLVSHAWTRGYYMRPRTDRSELEKYHEGLMVC
SACLGGEIPKRITNDQFAEAEEAIQWYKNLFGDDFYLEMQRHKATVPRANHECYPLQVKV
NKYLMEYSKKFNVKLVCTNDVHFVDEENAEAHDRLICLSTGKDMDDPTRMLYTKQEWMKT
REEMNELFADVPEALSNTLELLDKVEYYSIDHAPIMPTFAIPEDFGTEEEYRQKFTEKDL
YDEFTQDEHGNVVLSEEDGKAKIKRLGGYDKLYRIKLEGDYLAKLAFDGAKRIYGEPLTE
EVKERMNFELYIMKTMGFPGYFLIVQDFINAARKELGVSVGPGRGSAAGSAVAYCLGITK
IDPIQYDLLFERFLNPDRISLPDIDVDFDDDGRGEVLRWVTNKYGQEKVAHIITYGTMAT
KLAIKDVARVQKLPLSESDRLAKLVPDKIPDKKLNLRNAIEYVPELQAAEASSDPLVRDT
IKYAKMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEDTG
LIKMDFLGLKTLSIIKEAVENIRLSRSLEIDVDQIDINDPATYKLYSDGRTIGTFQFESA
GMQKYLRELQPSTFEDLIAMNALYRPGPMDYIPDFIDRKHGRKPIEYDIPVMEKYLKDTY
GITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFIEGGRKNGHDPKVL
EKIWTDWEKFASYAFNKSHATCYSWVAYQTAYLKANYPSEYMAAVMSRSLSNITDITKLM
DECKAMGIQTLGPDVNESNLKFTVNHDGNIRFGLGAVKGVGEAAVQSIMEERKKNGPFLG
IFDFVQRVNLNACNKKNMECLALAGGFDSFPELKREQYFAANSKGELFLETLMRYGNRYQ
ADKAAAVNSLFGGENVIDVATPEIPQGVERWSDLDRLNRERDLVGIYLSAHPLDEFSIVL
EHVCNTRMSELEDKAALAGREITMGGIVTSVRRGVSKNGNPYGIAKIEDYSGSTEIPFWG
NDWVTYQGYLNEGTFLYIKARCQAKQWRQDELEIKITSMELLPDVKEELVQKITIIIPLS
VLNTALVTELATLTKESPGNTELYFKVTDDSDTNHMSVDLISRPIKLSVGRDLITYLKER
PELGFRIN
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcgttcatttacacgtccatacgcaatattcccttttggacggtcaggct
agcgtcgctcgtctggtcgataaagcaatgcagaatggaatgaagggtattgccgtgacc
gatcatggaaatatgttcggtattaaggaatttacgaactacgtcaataagaagaatagt
ggtccgaaaggtgaaatcaaggacctgaaaaaacggttggtgggaattgaagccggctcc
atagagtgtgaagataaagaggcggaggttgcagcttgtaaagcaaagatagtggaggcg
gaaaacaaactgttcaaaccgattattgggtgcgaaatgtatgttgcccgccgcacaatg
gatctgaaagaaggcaaacaggaccagagcggttatcacttgattgtattagccaagaat
gagactggctatcataaccttataaaattagtatcgcacgcatggacgcgcggatattat
atgcgtccgcgtacagaccgcagcgaactggaaaaatatcacgaaggattaatggtttgt
tccgcttgtctcggtggcgagataccgaagcggattaccaatgaccagtttgccgaagcg
gaagaagctattcagtggtataagaatctgttcggcgatgatttttaccttgaaatgcag
cgccataaagcaactgttccccgggccaatcacgagtgctaccctttgcaggtaaaagtg
aacaaatatcttatggaatattccaagaagttcaatgtcaagttggtttgtacaaatgac
gttcatttcgtggatgaagaaaatgccgaagcacatgaccgtctgatctgtttgagtacc
ggtaaggatatggatgatcctacccgtatgctctataccaagcaggaatggatgaagaca
cgagaagagatgaacgagctctttgccgatgtgccggaagcgttgagtaatacattggaa
cttctcgataaagtagaatattattctatcgaccatgcccctatcatgcctacttttgcc
attcccgaggatttcggaacggaagaagaataccggcagaagtttacggagaaagacctt
tatgatgagttcactcaagatgagcatggcaatgtggtgttgagtgaagaagatggaaag
gcgaaaatcaagcgtctgggcggatatgataaattgtatcgtatcaaacttgaaggggac
tatctggctaaactggctttcgacggagcaaaaagaatatatggtgaaccgttgacggag
gaagtgaaggagcgtatgaacttcgaattgtacatcatgaagacgatgggtttccccgga
tacttcttgattgtgcaggactttatcaacgccgctcgcaaagagctcggagtgtcggta
ggtccgggacgtggttcggctgccggttcggcggtggcctactgtctgggtatcacaaag
atcgaccctatccagtacgacttactgttcgagcgtttcctgaacccggaccgtatctca
ttacctgatattgatgtggactttgatgatgacggtcgtggcgaggtacttcgttgggta
acgaataaatatggtcaagagaaggtggctcatatcatcacgtatggcacaatggctacg
aaactggctatcaaggacgttgcccgtgtgcagaaactccctctctcggaatccgaccgt
ctggctaaactagtacccgataagattcccgataagaaactgaatctccgcaatgcgata
gaatatgtcccggagttgcaggctgccgaagcctcttccgatcctttggtacgggatacg
atcaagtatgccaagatgctcgaaggaaacgttcgtggcactggtgtgcatgcctgcggt
acgattatttgtcgtgatgatattaccgactgggtgcctgtcagcactgccgatgataag
gagacaggtgaaaaaatgcttgtcacccaatatgaaggttcggtgattgaagataccgga
ttaatcaaaatggacttcctcggactgaaaactctttccattattaaggaagccgtcgag
aatatccgcctgagccgcagcttggaaattgatgtagaccagatagatattaacgaccct
gccacttacaaactatatagtgacggacgcacaattggtacattccagtttgaatctgcc
ggtatgcagaagtatctgcgcgaattacagccttctacttttgaggatttgatagccatg
aatgctctgtaccgtccgggacctatggattatattcctgattttatcgaccgcaagcat
ggacgcaagcctatcgagtatgatattccggttatggagaaatacttgaaagatacctac
ggaatcacggtatatcaggaacaggtgatgcttttgtcacgtctgctggcagactttacc
cgtggtgagtccgacgcccttcgtaaagcaatgggtaagaagttgcgtgacaagctggat
cacatgaaacctaaatttattgaaggaggacgtaagaacggacacgacccgaaagtactt
gaaaagatttggacggactgggaaaagtttgcgtcttacgctttcaataagtcacacgct
acctgttactcatgggtcgcttaccagacagcttatctgaaagcaaactacccatctgaa
tatatggcggctgtaatgagccgaagcttgtcgaacatcacggacatcacgaagttgatg
gacgaatgtaaggcaatgggtatccagacattgggaccggatgtaaatgagagtaacctg
aagtttacggtaaatcatgatggtaatatccgtttcggactcggtgccgtgaaaggagta
ggtgaggctgctgtacaaagcatcatggaggagcgtaagaagaacggtcctttccttgga
atcttcgactttgtgcaacgcgtcaacctgaatgcctgtaacaagaaaaatatggaatgc
ctggcattggccggcggattcgacagtttcccagagctgaaacgtgaacagtattttgcc
gctaactcgaaaggtgaattattcttggaaacattgatgcgttatggcaaccgctatcag
gcagacaaagctgctgccgtcaattctctgttcggaggcgaaaacgtaattgacgtcgct
acccccgaaattccgcagggagtggaacgttggagcgatctcgaccgcttgaaccgtgaa
cgtgacttggttggtatctatctttccgctcatccgttggatgaattttccattgtgctg
gaacacgtttgcaatactcgtatgagcgaactggaagataaagcagccctggcaggacgc
gaaataaccatgggaggaattgtgaccagtgttcgtcgtggagtcagcaagaatggtaat
ccgtatggcattgccaagattgaggactattccggctctaccgaaatcccgttttgggga
aatgactgggtgacttatcaagggtacctcaatgaaggaactttcctgtatatcaaggcc
cgttgccaagccaaacagtggcggcaggatgaactggaaatcaagattacctctatggaa
cttcttccggatgtgaaagaagaactggtacagaaaatcacgattattattcctttgtcg
gtattgaatacagctctggttactgaactggcaaccctcacgaaagagtctccgggcaat
acggaactttattttaaggtgacggatgacagcgataccaaccacatgtcggtcgatctg
atttcccgccccatcaaactttcggtgggaagagatttaataacatatttaaaagagcgt
ccggaacttggattccgcataaattga
DBGET
integrated database retrieval system
