| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bcac00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGC64_01830 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bcac03021]
CGC64_01830 (rpoC)
03400 DNA repair and recombination proteins [BR:bcac03400]
CGC64_01830 (rpoC)
Enzymes [BR:bcac01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGC64_01830 (rpoC)
Transcription machinery [BR:bcac03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGC64_01830 (rpoC)
DNA repair and recombination proteins [BR:bcac03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGC64_01830 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(407252..411535)
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| AA seq |
1427 aa
MAFRKENKTKSNFSKISIGLASPEEILENSSGEVLKPETINYRTYKPERDGLFCERIFGP
IKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDSIIYYERYVVIQPGVKAEDGVAEYDLLSEEEYLDILDTLPKDNQYLED
NDPNKFIAKMGAEAIYDLLARLDLDALSYELRHRAGNDASQQRKNEALKRLQVVESFRAS
RGRNKPEWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAP
EVILRNEKRMLQESVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPELKMGECGIPKLMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEPVI
WDILEHVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLACTAFNADFDGDQMAV
HLPLSNEAILEAQMLMLQSHNILNPANGAPITVPAQDMVLGLYYITKLRAGAKGEGLTFY
GPEEALIAYNEGKVDIHAPVKVIVKDVDENGNIVDVMRETSVGRVIVNEIVPPEAGYINT
IISKKSLRDIISDVIKVCGVAKAADFLDGIKNLGYQMAFKGGLSFNLGDIIIPKEKETLV
QKGYDEVEQVVNNYNMGFITNNERYNQVIDIWTHVNSELSNILMKTISSDDQGFNSVYMM
LDSGARGSKEQIRQLSGMRGLMAKPQKAGAEGGQIIENPILSNFKEGLSVLEYFISTHGA
RKGLADTALKTADAGYLTRRLVDVSHDVIITEEDCGTLRGLVCTDLKNNDEVIATLYERI
LGRVSVHDIIHPTTGELLVAGGEEITEEIAKKIQDSPIESVEIRSVLTCEAKKGVCAKCY
GRNLATSRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANIAANASIVAKNNARLE
FEELRTVDIVDEMGEAAKVVVGRLAEVRFVDVNTGIVLSTHNVPYGSTLYVGDGDLVEKG
KLIAKWDPFNAVIITEATGKIEFEGVIENVTYKVESDEATGLREIIIIESKDKTKVPSAH
ILTEDGDLIRTYNLPVGGHVIIENGQKVKAGEVIVKIPRAVGKAGDITGGLPRVTELFEA
RNPSNPAVVSEIDGEVTMGKIKRGNREIIVTSKTGEVKKYLVALSKQILVQENDYVRAGT
PLSDGATTPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEIIVRQMMRKVQIEE
PGDTRFLEQQVVDKLEFMEENDRIWGKKVVVDAGDSQNLQPGQIVTARKLRDENSMLKRR
DLKPVEVRDAVAATSTQILQGITRAALQTSSFMSAASFQETTKVLNEAAINGKIDKLEGM
KENVICGHLIPAGTGQREFEKLIVGSKEEYDRILANKKTVLDYNEVE |
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| NT seq |
4284 nt +upstreamnt +downstreamnt
atggcttttagaaaagaaaataagacgaaaagtaatttctcgaagatctcaattggtctg
gcttctccggaagaaatccttgagaattcgagtggtgaagttttgaagcctgaaaccatt
aattaccgtacttacaaacccgaacgtgacggtttgttttgtgaacgcatttttggtcct
ataaaggactatgagtgtcattgcggtaaatacaaacgtatccgttataaaggtatcgtc
tgcgaccgttgtggtgtggaagttactgaaaagaaggtacgtcgtgagcgtatgggacat
attcagttggtggtcccggtggctcacatttggtatttccgttcgctccctaataaaatc
ggttatttgctcggattaccgacgaagaagttggattcgattatatactacgaacgttat
gttgttattcagccgggtgtgaaagctgaagatggcgtagctgaatatgatttgctttct
gaagaagagtatctggatattcttgatacacttccgaaagataatcaatatcttgaggat
aatgatccaaacaaattcatcgctaagatgggtgctgaagctatctatgatttgctggct
cgtttggacctggatgctttgtcttacgaacttcgtcatcgtgctggtaacgatgcatca
cagcagcgtaagaatgaagcattgaaacgtcttcaggtagtagaatcattccgtgcatca
cgtggacgtaacaagccggaatggatgattgtacgtattgtaccggttatcccgcctgag
cttcgaccgttggttccgttggatggtggccgtttcgctacctcggacttgaatgatcta
tatcgtcgtgtgattattcgtaacaaccgtctgaaaagactgatcgaaattaaggctccg
gaagtgattttacgtaacgaaaaacgtatgcttcaggaatctgtggactcattgttcgat
aactcacgtaagtcaagtgcagtgaagacagatgctaaccgtccgttgaaatctttgtct
gacagtttgaaaggtaaacagggacgtttccgtcagaacttgttaggtaaacgtgttgac
tactctgcgcgttcggtaatcgttgttggcccggaattgaagatgggggaatgcggtatt
cctaaattaatggctgcagaattgtacaagccgtttattattcgtaaactcattgaacgt
ggtatcgttaagactgttaagtctgcaaagaaaattgttgaccgtaaggaacctgtgatc
tgggatattctggagcatgtaatgaaaggacatcctgtactgttgaaccgtgcaccgaca
ttgcaccgtttgggtattcaggctttccagcctaagatgatcgaaggtaaggctatccag
ttgcaccccttggcatgtacggcatttaatgccgactttgatggtgaccaaatggctgtt
cacttgcctttgagtaacgaagctattcttgaagcacaaatgttgatgcttcaatcacat
aatatcttgaatccggcaaacggtgcgcctattactgtgcctgcacaggatatggttctt
ggtttgtactacattactaagttgcgtgctggtgcaaaaggggaaggtttgacgttctac
ggaccggaagaagcgttgattgcttataatgaaggtaaggtagatatccacgctccggtg
aaggtaatcgtgaaagacgttgatgaaaatggtaacattgtagacgtgatgcgcgaaact
tccgtaggtcgtgtgattgtgaacgaaatcgttccgcccgaagcgggttatatcaatact
attatctctaagaaatctcttcgtgatattattagtgatgtaattaaggtttgtggtgta
gctaaagctgctgactttctggatggaatcaagaatttaggttaccagatggcattcaaa
ggtggtctgtcattcaacttaggtgatattattattccgaaagaaaaagaaacactggta
cagaaaggttatgacgaagttgagcaagtcgtaaacaactataatatgggtttcatcact
aacaatgaacgttataaccaggtgattgatatatggacgcatgttaactcagagttgtct
aatatcttgatgaagactatttcttcggatgatcaaggtttcaactctgtatatatgatg
cttgactctggtgcccgtggttctaaagaacagattcgtcagttgtctggtatgcgtggt
ttgatggcaaaaccgcagaaagcgggagcagaaggtgggcagattattgaaaacccgatt
ttgtcgaactttaaagaagggctttctgtgttggagtactttatctctactcacggtgct
cgtaaaggtttggcggatacggctttgaagactgccgatgccggttatctgactcgtcgt
ctggttgacgtatcgcatgatgtgattattacagaagaagactgcggtacactccgtgga
ttggtttgtacagaccttaaaaataacgatgaagttattgcaactctgtacgaacgtatc
ttaggtcgtgtttccgtgcatgatattattcatcctactaccggtgaactgttggttgct
ggtggggaagaaatcacagaagaaattgccaaaaagattcaggattctccgatcgagagt
gttgaaattcgttcggtattgacttgtgaagctaagaagggtgtttgtgctaagtgttat
ggacgtaaccttgctacgagccgtatggttcagaaaggtgaagctgtcggcgtaattgct
gctcagtctatcggtgagccgggtacacagttgacattgcgtacattccacgcaggtggt
actgctgccaatattgcagctaatgcaagtattgttgctaaaaataatgcacgtcttgag
tttgaagagttgcgtacagtagatattgtagatgaaatgggtgaagctgcgaaggtggta
gtaggtcgtttggctgaagttcgtttcgtagacgtgaacactggaatcgttctttctact
cataatgttccttatggttcaacactgtatgttggtgacggtgatttggtagaaaaaggc
aagttgattgctaaatgggacccgttcaacgctgttattataactgaagcaaccggtaag
atcgaatttgagggcgtaattgaaaacgttacttataaggttgagtcggatgaagcaaca
ggccttcgtgaaattattattattgaatctaaggataagacaaaagttccttcggctcat
attttaacagaagacggtgacttgatccgtacgtataacttaccggtaggtggtcacgtg
attattgaaaacggtcagaaagtgaaagctggtgaagtaatcgtgaagattccgcgtgcc
gttggtaaggcaggtgatatcacgggtggtcttcctcgtgtaaccgaattgtttgaagct
cgtaacccgtcgaatccagctgtcgtttctgaaatcgatggtgaggtgacaatgggtaag
atcaaacgtggtaaccgtgagatcatcgtaacttccaagactggtgaagttaagaagtat
ctggttgcattatctaaacaaatcttggtgcaggagaatgactatgtacgtgctggtact
ccattgtctgacggtgccactacaccggcggatattttggcgattaaaggtcctacggct
gtacaggaatatatcgtaaatgaagttcaggatgtatatcgtttgcagggtgtgaagatc
aatgacaagcacttcgagattattgtccgtcagatgatgcgtaaggtacagattgaagag
ccgggtgatactcgcttcttggagcaacaagttgttgacaagttggagttcatggaagaa
aacgatcgtatttggggtaaaaaagttgtggttgatgctggagattctcaaaacctacaa
ccgggacagattgttactgctcgtaagttgcgtgatgagaacagtatgctgaaacgtcgt
gacttgaaacctgttgaggttcgtgacgctgtggctgctacatctactcagattcttcaa
ggtataacacgtgctgctttgcagacttcaagctttatgtcagctgcttctttccaggaa
acaacgaaagtattgaatgaggctgctatcaacggtaagattgataaattggaaggtatg
aaggaaaatgtgatttgtggtcatttgattccggctggtacaggtcagcgtgaatttgag
aaacttattgttggttcaaaagaagaatatgatcgtattttggctaataagaaaacagta
cttgactacaacgaagtagaataa |
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