Bacteroides caccae: CGC64_01965
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Entry
CGC64_01965 CDS
T05064
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGC64_01965 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_01965 (priA)
Enzymes [BR:
bcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC64_01965 (priA)
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC64_01965 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
Cas3-like_C_2
nSTAND3
Zn_ribbon_6
AAA_30
AAA_19
IBR_1
Motif
Other DBs
NCBI-ProteinID:
ASM64854
UniProt:
A0A174U263
LinkDB
All DBs
Position
complement(434084..436540)
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AA seq
818 aa
AA seq
DB search
MKKYVDVILPLPLPKSFTYSLPDECAEEVKIGCRVVVPFGRKKFYTAIVLNVHYCAPTEY
EVKDISALLDASPILLPVQFKFWEWIADYYLCTQGDVYKAALPSGLKLESETIVEYNPDF
EADAPLPEREQRILDLLAVDAQQCVTKLEKESGIKNILTVIKSLLDKEAIFVKEELRRTY
KPKTEARVRLAGSADEKRLHILFDILSRAPKQLALLMKYVECSGILGNEVPKEVSKKELL
QRANVSPSILNGLVEKKIFEIYHHEIGRLNQQVKEVVELNTLNEFQQRAHDEIVQSFREK
NVCLLHGVTSSGKTEVYIHLIEETIRQGKQVLYLLPEIALTTQITERLQRVFGSRLGIYH
SKFPDAERVEIWRKQLGENGYDIILGVRSSVFLPFRNLGLVIVDEEHENTYKQQDPAPRY
HARSAAIVLAAMYGAKTLLGTATPSIETWQNATDGKYGFVQLKERYKEIQLPEIIPVDIK
ELHRKKRMVGQFSPLLVQYMKEALEQKEQVILFQNRRGFAPMIECRTCGWVPKCKNCDVS
LTYHKGINQLTCHYCGYTYQLPKACPACEGTELVNRGFGTEKIEDDIKILFPEAAVARMD
LDTTRTRSAYEKIIADFEQGKTDILIGTQMVSKGLDFDHVSIVGILNADTMLNYPDFRSY
ERAFQLMAQVAGRAGRKNKRGRVILQTKSIDHPIIHQVIANDYEDMVGGQLAERQMFHYP
PYYRLVYVYLKNHNESLLDQMAAVMAGKLRAVFGNRVLGPDKPPVARIQTLFIKKIVVKI
EQNAPMGRARELLLRIQREMIEDERYKSLIVYYDVDPM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtatgtagatgtcatattaccgcttccgcttccaaagagctttacttactct
ttgccggatgagtgtgcggaagaagtgaagatcggttgccgcgtggtagttcctttcgga
cggaagaagttctatacggctatcgttcttaatgttcattattgtgctccgacggagtat
gaggtgaaggacatatctgcattgctggatgcttctcctatattattgcctgttcaattc
aagttttgggagtggatagccgattattatctctgtacgcaaggggatgtttataaggcg
gcgctgccttcgggattgaaactcgaaagcgaaacgattgtagagtataatcccgatttt
gaagcggatgcaccattgccggaacgtgaacagcgcattctggatttgcttgccgtggat
gcacagcagtgtgtcactaagctggagaaggagagcgggataaaaaatattctgactgtc
atcaagtcgctgctcgataaagaagcgatttttgtaaaggaggagttgaggcgtacttat
aaacccaagacggaggcgcgggtgcggcttgcgggttcggcggatgaaaaacggctgcat
atactgtttgatatcctgtcgcgtgctccgaagcagttggcattgttgatgaaatatgtg
gaatgttcggggattctgggaaatgaagtcccgaaagaagtctccaagaaagaactgttg
caacgcgccaatgtgtcgccttccattctgaacggtctggtagagaaaaagatatttgag
atttatcatcatgagatcggccggttgaaccagcaggtgaaggaggtcgtcgaactgaat
acgttgaatgagtttcagcaacgggcacacgatgaaatcgtacagtccttccgggaaaag
aatgtctgcctgcttcatggggtgacgtccagtggtaagacggaagtatatattcatctg
atagaagaaactattcgtcagggaaagcaagtattgtatttgttgcctgagattgccctg
actacccagattacagaacgtctgcaacgggttttcggctctcggctgggcatttatcac
tctaagtttcccgacgccgaacgggtggagatatggcggaaacagttgggagaaaatggt
tatgatattattttgggagtccgttcttccgttttcctccctttccggaacctgggactg
gtgattgtggacgaggaacacgagaatacttataagcagcaagaccctgctccccgttat
catgcacgtagcgcagctattgtactggctgccatgtatggagctaaaacactgttggga
acggctactccttctatcgagacatggcagaacgcgacggacggaaaatacggctttgtc
caactgaaagaacgctataaagagattcagttgccggagattatcccggtagatatcaag
gaactgcaccgtaagaaacgaatggtcggacagttctcgcctttgctggtacaatatatg
aaagaagccctggaacagaaggaacaggtgattcttttccagaaccgtcgcggcttcgct
cccatgatagaatgccgtacttgcggctgggtgccgaagtgcaaaaactgtgatgtgagc
ctgacttaccacaaaggaatcaatcaactgacctgccactattgcggctatacctatcaa
cttccgaaggcctgtcccgcttgcgaaggtacggaactggtgaaccgcggctttggtacg
gaaaagattgaggacgacatcaaaatccttttccccgaagcagccgtggcgcgtatggat
ttggataccacccgcacccgctctgcttacgaaaagattattgcagactttgaacaggga
aagaccgatattctgatcggtacgcaaatggtgtcgaagggtttggacttcgaccatgta
agtatcgtcggaatactgaatgccgatacgatgttgaattatcccgatttccgttcttac
gaacgtgccttccagctaatggcacaagtagcgggacgcgccgggcgtaagaataaacgc
ggacgtgtgatactccagaccaagagtatcgaccaccctattattcatcaggtgattgcc
aatgactatgaagatatggtaggcgggcaactggcggagcgtcagatgttccactatcct
ccttattatcgcctggtatatgtttatctgaaaaatcataatgagtcgttgctggatcaa
atggcggcggtaatggccggcaagttgagggcagtattcggcaaccgggtgctgggaccg
gataaacctcctgttgcccgtatccagacactgttcatcaaaaagatcgttgtgaagata
gaacagaatgccccaatggggcgtgcccgggaactgcttttgcgcattcaacgggagatg
atagaagatgagcgttataagtccctgatagtctactatgatgtagaccctatgtga
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