Bacteroides caccae: CGC64_02555
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Entry
CGC64_02555 CDS
T05064
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcac
Bacteroides caccae
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcac03032
]
CGC64_02555 (topA)
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_02555 (topA)
Enzymes [BR:
bcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CGC64_02555 (topA)
DNA replication proteins [BR:
bcac03032
]
Prokaryotic type
DNA Topoisomerases
CGC64_02555 (topA)
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CGC64_02555 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ASM67753
UniProt:
A0A174PX75
LinkDB
All DBs
Position
603769..606114
Genome browser
AA seq
781 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKEFSIDVEKNFKPNYEIPADK
KALVSTLKAEAKEAETVWLASDEDREGEAIAWHLYEVLKLKPENTKRIVFHEITKSAILK
AIEQPRDIDINLVNAQQARRILDRIVGFELSPVLWRKVKPALSAGRVQSVAVRLIVERER
EIHAFKSEAAYRVTAVFLVPDTDGKLVEMKAELAHRIKTKKEAEAFLNACKGANFAIEDI
TTRPLKKTPPAPFTTSTLQQEAARKLGYTVAQTMMIAQRLYESGFITYMRTDSVNLSEFA
TIGSKDAIIKMMGERYVHPRHFETKTKGAQEAHEAIRPTYMENQSIEGTAQEKKLYDLIW
KRTIASQMADAELEKTTVTISISSSSEVFTAIGEVIKFDGFLRVYRESYDDENEQEDESN
LLPPLKKGQKLEHGPIVATERFTQRPPRYTEASLVRKLEELGIGRPSTYAPTISTIQNRE
YVEKGNKDGEERMFNVLTLKDQQVKDENHTEITGTEKAKLFPTDTGTVVNDFLTEYFPDI
LDYNFTASVEKEFDEIAEGEVKWTSILKTFYDQFHPSVENTLAIKTEHKVGERILGEEPE
TGKPVSVKIGRFGPMAQIGTAEDEEKPRFAQMKKGQSIETITLEEVLELFKLPRTLGEYE
GKTVSVGIGRFGPYVLHNKVYVSLPKTMDPMEITLEEAEQLILEKRTKEAERHIKKFAEE
PELEILNGRYGPYIAYKGNNYKIPKDIVPQDLSLHSCMELIRIQDEKGVTSAPKKKFAKK
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaccttgtcattgtcgagtctccggcaaaagcaaaaacgattgaaaagttt
cttgggaaagatttcaaagtcctttcaagttacggacatatacgcgatctgaagaaaaaa
gagttcagtatcgacgtagagaagaattttaaacccaattatgaaattccggcagacaaa
aaggctctggttagcacactgaaagcagaagcgaaagaggcagaaaccgtatggctcgca
tccgatgaggaccgcgagggagaggctatcgcctggcatctgtatgaggtcttaaaacta
aaaccggaaaacacaaaacgaatcgtatttcatgaaattacgaaaagtgctatcttaaaa
gcaatcgaacaaccacgtgatattgacattaacctcgtgaatgcacagcaagcacgacgt
attctggaccgtatcgtaggttttgaactgtctcctgtactttggagaaaagtgaaaccg
gcgctttcggcaggacgtgtacaatcggttgccgttcgactgattgttgagcgcgaacgc
gaaatccatgctttcaaatcggaagcagcttaccgtgtgaccgccgttttccttgtgccc
gacactgatgggaaactagtggagatgaaagccgaactggcccaccgtatcaaaacgaag
aaagaagcagaagcattcctcaacgcatgtaaaggagctaattttgctatcgaagatatt
actacccgtccgttaaagaaaacacctcctgctccgttcacaacttcgacattgcaacag
gaagctgcacgcaaattaggctatacggtggcgcaaactatgatgattgcccaacgtttg
tacgaatcgggatttatcacctatatgcgtaccgactccgtgaacttgtcggaatttgca
accataggcagtaaggatgctatcatcaaaatgatgggtgaacgttatgtgcatcctcgt
cactttgaaacgaaaaccaaaggggcacaggaggcacatgaagcaatccgtcctacctat
atggaaaaccagtccatcgaagggacagcgcaggagaaaaaactgtacgacttgatatgg
aaacgtaccattgcctcacaaatggcagatgcggaactggaaaagacaactgttacaata
tcaattagcagtagtagtgaagtctttacagctatcggtgaagttattaaattcgatgga
ttcttgcgtgtataccgtgaatcttatgacgatgaaaatgaacaagaggatgaaagtaat
ctgttgcctcctctgaaaaaaggtcagaaactggaacacggtcctatcgttgcaaccgaa
cgttttacccaacgcccaccgcgctataccgaagcaagtcttgtacgtaaattggaggag
ctgggaatcggtcgcccatctacgtatgcgcctaccatttccacgattcagaatcgcgaa
tatgtggaaaaaggcaataaagacggagaagaacggatgttcaatgtgctgacattaaaa
gaccaacaagtcaaagacgaaaatcatactgaaattaccggaacagaaaaggccaagtta
ttccctacggataccggaacggtagtaaatgatttcctcaccgaatatttccctgatatt
ctggattataactttacagctagtgtagaaaaagagttcgatgaaattgccgaaggagaa
gtgaaatggacttcaattctgaaaaccttctacgaccaattccacccgtcagtagaaaac
actttggcaataaagactgaacataaagtaggcgaacgtattttgggtgaggaaccggaa
acaggtaaacctgtttcggtaaaaatcggacgttttggtcctatggcgcaaatcggtacg
gcggaagatgaagaaaagccacgttttgcacaaatgaaaaaaggtcagtccatagaaacg
atcacattggaagaagtgctggaattgttcaagctgccccgtacgttaggcgaatatgaa
ggaaagacagtcagtgtaggtattggtcgtttcggtccgtatgtactacataataaggtg
tatgtatcgctcccgaaaacgatggatcccatggaaattactttagaagaggcggaacaa
ctgattctagagaaacgcacaaaggaagccgaacgccacatcaagaagttcgcagaagaa
ccagaattggaaattctgaatggtcgttacggaccatatatagcatataaaggtaataac
tataagattcctaaagatattgtcccacaggatttaagcctgcatagttgcatggaatta
atcaggatacaggacgagaaaggtgttacctcagcaccaaaaaagaaatttgcaaaaaag
aagtaa
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