Bacteroides caccae: CGC64_03475
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Entry
CGC64_03475 CDS
T05064
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bcac
Bacteroides caccae
Pathway
bcac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CGC64_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcac03021
]
CGC64_03475
Transcription machinery [BR:
bcac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CGC64_03475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
HTH_11
HTH_24
PF0610-like_N
DUF722
HTH_40
HTH_5
HTH_Tnp_4
HTH_20
HTH_10
HTH_Tnp_ISL3
Phage_terminase
DUF5920
HTH_28
DUF1492
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
ASM65102
LinkDB
All DBs
Position
complement(877353..877901)
Genome browser
AA seq
182 aa
AA seq
DB search
MISKELIRRFKNGDEDAFSFLYKHYWEKVYGFTRLYLVSSEDIAEVVQEVFIKLWEARHL
IDEEQPFEGFLFIITRNMIFNYSRKKLNYSFLKVTVLQAMEQEYEEENKLELSDLKKYLS
VLISQLPPRQQEIFRMSREQNLTYKQIAEQLSISEKTVEYHMGLALKYLRKNLYLLSLFL
SV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgatatctaaagagttgattagaaggtttaaaaatggagatgaagatgctttttcattt
ctatataaacattactgggaaaaggtctatggctttacccggctttatctagtttcttct
gaagatatcgcagaagtggtacaagaggttttcatcaaactctgggaagcaagacatctg
atagatgaagagcagccttttgaagggtttctttttatcattacccgtaatatgattttt
aattattcacgcaaaaaattaaactactcatttctgaaagttactgttctacaagcaatg
gaacaagaatatgaagaagaaaataagttggaattatccgatttaaaaaagtatctttca
gtactaatatcacaattacctccacggcagcaagaaatctttcgcatgagccgggagcaa
aacttaacctataaacaaattgccgagcaattgtctatcagtgaaaaaactgtagaatat
catatgggattggcattaaaatacttacgaaaaaatctctatttgctttctctgtttttg
tctgtttaa
DBGET
integrated database retrieval system
