Bacteroides caccae: CGC64_04330
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Entry
CGC64_04330 CDS
T05064
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bcac
Bacteroides caccae
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CGC64_04330 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcac03019
]
CGC64_04330 (rnc)
03009 Ribosome biogenesis [BR:
bcac03009
]
CGC64_04330 (rnc)
03036 Chromosome and associated proteins [BR:
bcac03036
]
CGC64_04330 (rnc)
Enzymes [BR:
bcac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CGC64_04330 (rnc)
Messenger RNA biogenesis [BR:
bcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGC64_04330 (rnc)
Ribosome biogenesis [BR:
bcac03009
]
Eukaryotic type
90S particles
RNase
CGC64_04330 (rnc)
Prokaryotic type
rRNA processing factors
CGC64_04330 (rnc)
Chromosome and associated proteins [BR:
bcac03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CGC64_04330 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_CARF
LPP20
Motif
Other DBs
NCBI-ProteinID:
ASM65260
UniProt:
A0A6L3KX45
LinkDB
All DBs
Position
complement(1135588..1136577)
Genome browser
AA seq
329 aa
AA seq
DB search
MRALSSKNTLSKIVLRNQIDKIRLLFHRDRESYLCFYRILGFYPRNIQLYEQALLHKSSS
VRSDKGRPLNNERLEFLGDAILDAIVGDIVYKRFEGKREGFLTNTRSKIVQRETLNKLAV
EIGLDKLIKYSTRSSSHNSYMYGNAFEAFIGAIYLDQGYERCKQFMEQRIINRYIDLDKI
SRKEVNFKSKLIEWSQKSKLEVSFELIEQFLDQDSNPVFQTEVRIEGLPAGTGTGYSKKE
SQQNAAQMAIKKVKDPTFMATVNETKMQQSAMAAEPEPEMDADSDIELLNDNILEENEFD
NEITAEPIVESIQSKSPCDVPESPDRDPH
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgttatcttcaaaaaatacgctgagtaaaatcgtgttacgaaaccaaatagat
aagataaggctcttgttccacagggatagagagtcttatctttgtttttaccggatactc
ggtttctacccgcgtaacatccagctctatgagcaggctctcttacataaatcctcatct
gtccgttcggacaaggggcgtccgttaaacaatgagcgtctggaatttttaggtgatgcc
attctcgacgctatcgtaggcgatatcgtctacaaacgttttgaagggaagcgggaaggt
ttcctgacaaacacacgttccaagattgtacaacgggagactttaaacaaacttgccgta
gagatcggactggacaaacttattaaatattcaacccgttcttcttcccacaacagctat
atgtacgggaatgctttcgaggcatttatcggagcgatctacctggaccagggatatgaa
cgctgcaaacagtttatggagcagcgaatcattaatcgttatattgatctggataaaatc
tcccgtaaagaagtaaacttcaaatcaaaactgatcgaatggagccaaaagagcaaactg
gaggtttcttttgaactgattgagcaattccttgatcaggacagcaatcctgttttccag
acagaagtacgcattgaaggacttcctgccggaaccggaaccggatattccaagaaagaa
tcccaacagaatgccgcccaaatggctataaagaaagtaaaggacccgactttcatggca
accgtcaacgaaaccaaaatgcagcaatcagcaatggcagccgaacctgaacccgaaatg
gatgcagactctgatatcgaattgctgaatgacaatatattggaagaaaatgagttcgac
aatgagattacggcagaaccgatcgtggaatctatccaaagcaaatccccatgcgacgtc
cctgaatcaccagatcgtgatcctcactaa
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