Bacteroides caccae: CGC64_05855
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Entry
CGC64_05855 CDS
T05064
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
bcac
Bacteroides caccae
Pathway
bcac00550
Peptidoglycan biosynthesis
bcac01100
Metabolic pathways
bcac01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CGC64_05855 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CGC64_05855 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcac01011
]
CGC64_05855 (mrdA)
Enzymes [BR:
bcac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CGC64_05855 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
bcac01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CGC64_05855 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
YqfD
Motif
Other DBs
NCBI-ProteinID:
ASM65529
UniProt:
A0A174HME3
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All DBs
Position
1498015..1499877
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AA seq
620 aa
AA seq
DB search
MAKDYRLEKRKFVIGGIALSIVLIYLIRLFVLQITTDDYKKNADSNAFLNKIQYPSRGAI
YDRTGKLLVFNQPAYDITIVPKEVENLDTLDLCQSLNITRAQFLKIMSDMKDRRRNPGYS
RYTNQLFMSQLSAEECGVFQEKLFKFRGFYIQRRTIRQYSYDAAAHALGDIGEVSAKEME
ADEEGYYIRGDYVGKLGVEKSYEKYLRGEKGIEILLRDAHGRIQGHYMDGEYDRPSVPGK
NLTLSLDIDLQMLGERLLKNKIGSIVAIEPETGEILCLVSSPNYDPHLMIGRQRGKNHLM
LQRDKMKPLLNRALMGVYPPGSTFKTAQGLTFLQEGIVTEQAPSFPCSRGFHYGRLTVGC
HAHGAPIPLIPAIATSCNSYFCWGLFRMFGDRKYGSPQNAITVWKDHMVSQGFGYKLGVD
LPGEKRGLIPNAQFYDKAYRGHWNGLTVISISIGQGEILATPLQIANLGATIANRGYFIT
PHIVKEIQDNQLDSIYRTPRYTTIEKRHYESVVEGMRGAATGGTCRMLSVMVPDLEACGK
TGTAQNRGHDHSVFMGFAPMNKPKIAIAVYVENGGWGATYGVPFGALLMEQYLKGKLSPE
NELRAEEFSNRVILYGNEER
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagattatagactggagaaacggaaatttgttatcgggggaattgcactgtct
attgtgctgatttatctgatccgtctttttgtattgcagattactaccgatgattataag
aagaacgccgatagcaatgcgttcctgaataaaattcaatatccttcacgcggagctatc
tatgaccgtacaggtaagttgctggtttttaaccagcctgcttatgatataacgattgtc
ccgaaagaagtagagaacttggatacactcgacctgtgccagtcgttgaatattactcgt
gctcaattcctgaaaatcatgagcgacatgaaagaccgtcgccggaatccgggatattcc
agatacactaatcaattgtttatgtcgcaactttcggcggaagaatgtggcgtctttcag
gagaagttgtttaaattccgtggcttctatatccagcggcgtacgattcgccaatactct
tatgatgctgccgcgcatgccttgggtgatattggagaagtctcggcaaaagaaatggaa
gccgatgaagaaggctactacattcgtggcgattatgtcggcaagttgggtgtagagaaa
tcgtatgagaagtatctgcgtggagagaaaggcattgaaattctgcttcgtgatgctcac
ggacgtattcaggggcattatatggacggagaatatgaccgtccttccgtacccggaaag
aacttgacactcagtttggatattgacttgcagatgttgggtgaacggttactgaaaaat
aagatcggaagtattgttgctattgagccggagacaggagagattctttgtctggtatct
tcgccgaattacgacccgcatttgatgattggccgtcagcgtggaaagaaccatctgatg
ttgcagcgtgataagatgaaaccgcttctgaatcgtgcattgatgggagtatatcctccg
ggttctacttttaagacggcacagggattaacttttttgcaggaaggcattgtgactgag
caggctccttctttcccttgttcgcgcggtttccattacggcaggctgacggtgggatgt
catgcccacggagcaccgataccacttattcctgctattgctacatcgtgcaactcttat
ttttgttggggactgttccgtatgttcggcgaccgtaaatacggttcaccgcaaaacgca
attacagtctggaaagatcacatggtttcccaaggcttcggttataagttaggtgttgat
ttgcccggagagaaacgtggtttgattccgaatgcacagttctatgataaggcttatcgc
ggccattggaatggactgacggtaatcagtatttcgatcgggcagggagaaattctggct
actcctctccagatagccaatctaggtgcaacgattgccaatcgcggatattttatcaca
ccgcatattgtgaaggagattcaagataatcagttggatagtatttatcgtacgccacgt
tatactacaattgagaaacggcattatgaatcggtggtggaagggatgcgcggagctgcc
acaggcggaacttgccgtatgttgtcggtaatggttccggacttggaagcttgtggaaag
acgggtacggcacagaaccgcggacatgaccattctgtatttatgggctttgcgccgatg
aacaagccgaagatagccattgctgtgtatgtggagaatggaggttggggagctacatac
ggagtacctttcggggcattgcttatggagcagtacttgaaaggcaaactatctcccgag
aatgaattgagagcagaagaatttagtaacagagtgatattgtatggtaacgaggaacga
tag
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