Bacteroides caccae: CGC64_05995
Help
Entry
CGC64_05995 CDS
T05064
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC64_05995 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcac03019
]
CGC64_05995 (recQ)
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_05995 (recQ)
Enzymes [BR:
bcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC64_05995 (recQ)
Messenger RNA biogenesis [BR:
bcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGC64_05995 (recQ)
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CGC64_05995 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
HTH_40
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ASM65549
UniProt:
A0A174X5X3
LinkDB
All DBs
Position
1524092..1526272
Genome browser
AA seq
726 aa
AA seq
DB search
MAGKINLINELKKCFGFNKFKGNQEAIIQNLLDGRDTFVLMPTGGGKSLCYQLPSLLMEG
TAIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSLNKGAIDQVKSDILAGKTKLLYVAP
ESLTKEENVDFLRSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTAT
ATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKFIKNNPEKSGIVY
CLSRKRVEELAEILQANGINARPYHAGMDSLTRTKNQDDFLMEKVEVIVATIAFGMGIDK
PDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEI
GKQLLLETAAYAESSVCRRKTLLHYFGEEYTEENCGNCDNCLNPKKQVEAQELLCAVIEA
IIAVKENFKADYIIDILQGRETSEVQAHLHEDLEVFGSGMGEEDKTWNAVIRQALIAGYL
SKDVEHYGLLKVTEEGHKFLKKPKSFKITEDNDFEEVEEEVPARGGGSCAVDPALYSMLK
DLRKKLSKKLEVPPYVIFQDPSLEAMATIYPVTLEELQNIPGVGAGKAKRYGEEFCKLIK
RHCEENEIERPEDLRVRTVANKSKMKVSIIQAIDRKVALDDIALSKGIEFGELLDEVEAI
VYSGTKLNIDYFLEEIMDEDHLLDIYDYFKESTTDKIDDALDELGDDFTEEEVRLVRIKF
ISEMAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaagattaatttaataaatgaactgaagaagtgtttcggatttaataaattc
aagggaaaccaggaagcaatcattcagaacttgcttgatggtagagacacctttgtactg
atgcctaccggtggcgggaaatccttatgctatcagttaccttcgctcttgatggaagga
acggcaattgtaatttctccgcttattgcgttgatgaagaaccaagtggatgcaatgcgt
aattttagtgaagaagatggtatcgcccattttattaattcttcattaaacaaaggcgcg
atagaccaagtgaagtctgacatccttgccggaaagacaaaattgttatatgtggctccg
gagtctttgacaaaggaagagaatgtagattttttgcgctcggtgaaaatttcgttttac
gcggtagacgaggctcactgtatttccgaatgggggcatgacttccggccggaatatcgg
cggattcgtcctatcatcaacgagatcggaaaggctccgttgatagcacttactgcaacg
gcaacgccaaaggtgcagcacgatatccagaagaatctgggaatggtggatgcacaggtt
ttcaagtcatcgttcaaccgtccgaacctgtattatgaggtacgcgcgaaaactgctaat
attgatcgtgatattatcaagtttatcaagaataatccggaaaaatcgggtatcgtttac
tgccttagtcggaagagagtagaagaacttgctgaaattcttcaggcaaacggtatcaac
gcgcgtccttaccatgcgggtatggactcattgacgaggacgaagaatcaggatgatttc
ctgatggaaaaagtggaagtcattgtggctacgatcgctttcggtatggggattgataaa
ccggatgtgcggtttgtgattcactatgatatcccgaaaagcttggaaggatattaccag
gaaacggggcgcgccggtagagatggcggtgaaggtcagtgcataaccttttatacaaac
aaagacttgcagaaactggaaaagttcatgcaagggaaacctgtggcagaacaggaaatt
ggcaagcagcttctgttggaaaccgctgcttatgccgaatcttccgtatgccgacgtaag
acattactacattatttcggtgaagagtacacggaagaaaattgtggaaattgtgacaac
tgtttaaaccctaaaaaacaagtggaggctcaagaattattgtgtgccgtgattgaagcg
attatcgcggtgaaagaaaactttaaggcagattatatcattgacatattacaaggtaga
gagacttcggaggtacaggctcatttgcatgaggacctcgaagtatttggctcaggtatg
ggcgaagaagacaaaacatggaatgcagtaatccgtcaggctctgatagcaggctatttg
agcaaagatgtagaacattacggtcttttgaaagtgacggaagaaggacacaagttcttg
aagaaacctaaatcattcaagataacggaggataatgactttgaagaagtggaggaggaa
gtaccggcacgcggcggtggctcttgtgcagtagaccctgctctttattcaatgttgaaa
gacttgaggaagaagctctctaagaaactggaagttcctccttatgtaattttccaggac
ccgtctttggaagcaatggctactatctacccggtaacactggaagagctacagaatatt
cccggtgtaggtgccggaaaggcgaaacgctacggtgaagaattctgtaaactgattaaa
cgtcactgtgaagagaatgaaatagaacgtcccgaagacttgcgtgtacgtacggttgct
aataagtcgaaaatgaaagtgtctatcattcaggctattgaccgtaaggtagccttagat
gatattgctctatccaaaggtattgaatttggagaactgttggatgaagtagaagcaatt
gtctattccggaaccaaactgaatattgattacttcttggaagagatcatggatgaagat
catttgcttgacatctacgattattttaaggaatctacgacagacaagattgatgatgca
cttgatgaactgggggatgacttcactgaagaagaagttcgtttggtacgtattaagttc
atctctgaaatggcaaactaa
DBGET
integrated database retrieval system
