Bacteroides caccae: CGC64_06100
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Entry
CGC64_06100 CDS
T05064
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bcac
Bacteroides caccae
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcac03009
]
CGC64_06100
Enzymes [BR:
bcac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CGC64_06100
Ribosome biogenesis [BR:
bcac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CGC64_06100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ASM65568
UniProt:
A0A174P8W8
LinkDB
All DBs
Position
1550193..1551677
Genome browser
AA seq
494 aa
AA seq
DB search
MSTENEEWRENSFNEENTGAGRDGNRSYNREGGERPYRPSYNREGGDRPYRPRFNANNEG
GERPQRSYGDRSYGDRPQRPSYNREGGDRPYRPRFNNNSEGGDRPQRPYNREGGSYGDRP
QRPSYNREGGDRPYRPRFNPNSDGSDRPQRPYNREGGEQRSYGDRPYRPRFNSGEGGDRP
QRPYNREGGDRPYRPRFNSGEGGGYRSNNGGGYRPRFNNDRQGGYRPRPRTGDYDPNAKY
SIKKQIEYKEQFVDPNEPIRLNKFLANAGVCSRREADEFITAGVVSVNGEVVTELGTKIK
RSDVVKFHDEPVSIERKVYVLLNKPKDTVTTSDDPQERRTVMDLVKGACNERIYPVGRLD
RNTTGVLLLTNDGDLASKLTHPKFLKKKIYHVHLDKNLTKADMDQIAAGIQLEDGEIHAD
AISYTDDFKKDQVGIEIHSGKNRIVRRIFESLGYKVVKLDRVFFAGLTKKGLRRGDWRYL
SEAEVNYLRMGSFE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaaaacgaagaatggcgcgaaaattctttcaatgaagagaatacaggtgcc
ggccgtgatggtaacaggtcgtacaacagagagggaggagaacgtccgtatcgtccttct
tacaaccgtgaaggtggggatcgtccgtatcgcccgagatttaatgccaacaatgaaggg
ggcgaacgcccacagcgttcgtatggtgatcgctcttatggcgaccgtccgcaacgtcct
tcttacaatcgtgaaggcggtgatcgtccgtatcgtcctcgcttcaataacaatagtgaa
ggtggcgaccgtccgcaacgtccttacaaccgcgaaggtggttcttatggtgatcgtcct
caacgcccttcctacaatcgtgaaggtggtgatcgtccgtatcgtccgagatttaatccg
aattctgacggcagcgaccgtcctcagcgtccttacaaccgtgaaggcggcgaacaacgc
tcttatggtgatcgtccgtatcgtccccgtttcaatagtggtgaaggtggcgaccgtcct
cagcgtccttacaaccgcgaaggtggtgaccgcccgtatcgtcctcgcttcaatagtggt
gaaggtggaggctatcgcagcaacaacggtggtggctatcgtccgagattcaataatgac
cgtcagggcggttaccgtcctcgtccacgtaccggcgattatgacccgaatgctaaatat
agcataaagaaacaaatcgagtacaaggaacagtttgttgacccgaacgaaccgattcgt
ctgaataaattcctggctaatgccggtgtttgttcacgtcgtgaggctgatgaatttatt
acagcaggtgtggtttctgtaaatggtgaagttgttactgaattgggtacaaaaatcaaa
cgctcggatgtcgtgaaattccacgatgaaccggttagcatcgaacgtaaggtatatgta
ttgctgaataagccgaaagatactgttaccacatcggatgatccgcaggagcgccgtacg
gtaatggatttggtaaaaggcgcttgtaacgaacgtatctatccggtaggacgtcttgac
cgtaacacgactggtgtactgttactgacaaatgacggtgacttggcttccaagctgaca
catccgaaatttctgaaaaagaaaatttatcatgttcatctggacaagaacctgacaaaa
gcggatatggatcagattgcagccggcatccagttggaagacggtgaaatccatgcagac
gctatcagctataccgatgatttcaagaaagaccaggtaggtatcgaaattcactccggt
aagaaccgtatcgttcgccgtattttcgaatcactgggttataaagtagtaaaactcgac
cgtgtattcttcgccggactgactaaaaaaggtttgcgtcgcggagactggcgttacctg
tcggaagcagaagtaaactacctccgcatgggttcgtttgaataa
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