Bacteroides caccae: CGC64_06400
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Entry
CGC64_06400 CDS
T05064
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC64_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcac03019
]
CGC64_06400
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_06400
Enzymes [BR:
bcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC64_06400
Messenger RNA biogenesis [BR:
bcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGC64_06400
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CGC64_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_Crp_2
HTH_9
HVO_A0261_N
KGK
Motif
Other DBs
NCBI-ProteinID:
ASM65621
UniProt:
A0A174WAF0
LinkDB
All DBs
Position
complement(1607386..1609290)
Genome browser
AA seq
634 aa
AA seq
DB search
MNKYQEILKQYWGYDSFRDLQEEIITSIGEGKDTLGLMPTGGGKSITFQVPALAQSGLCI
VITPLIALMKDQVQNLRKRGIKALAIYSGMTRQEIVTALENCIFGDYKFLYISPERLDTE
IFRIKLRSMKVSMITVDESHCISQWGYDFRPAYLKIAEIRELLPGVPVLALTATATPEVV
KDIQSRLNFREENVFRMSFERKNLAYIVRKTDNKTGELLHILKRIDGSAIIYVRNRRRTK
EITELLMQEGITADFYHAGLDNAVKDLRQKRWQNGEIRVMVATNAFGMGIDKPDVRIVLH
IDLPDSPEAYFQEAGRAGRDGLKAYAVILYAKSDKMTLHKRVADTFPEKEYILQVYEHLQ
YYYQMAMGDGFQCIREFNLEEFCRKFKYFPVPVDSALKILTQAGYLEYTDEQDNASRILF
TIRRDELYKLREMGTEAETLIQTILRSYTGVFTDYAYISEDTLAIRTGLTRQQIYNILVT
LTKRRIVDYIPHKKTPYIIYTRERLELRYLHIPASVYEERKARYEARIKAMEEYVTSESV
CRSRMLLRYFGEKNEHNCKQCDVCLNRHETDCLPEDSFREMRKQILELLARKSLPPAGIA
NAIEAEREDISRVIQYLLEEGELKMQDGMLHISK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgaataagtatcaggagatattaaaacaatattggggatatgactccttccgcgacttg
caggaggagatcatcaccagtataggcgaaggtaaggacacgctggggttaatgccgacc
ggaggtggtaaatctatcacattccaggtgcccgctctcgcccagagtggactttgtatt
gtcattacacccctcatcgccctgatgaaagaccaggtgcagaatctgcgcaaacgcgga
atcaaagcgctcgccatatattccggcatgacacgtcaggagattgtcactgcgctggaa
aactgtatcttcggcgactataagttcctttatatctctccggaacggctggatacggaa
atattccgtatcaaacttcgttcaatgaaggtctccatgattacggtagacgaaagccac
tgtatctcacaatgggggtatgatttccgtccggcttacctgaagatagcagaaatacgg
gaactgctgccgggtgttccggtgctggcactaacggcaacggctactccggaagtcgta
aaagatattcagtcacggctgaactttcgcgaagagaatgttttccgtatgagtttcgaa
cggaagaatctggcatatatcgtccgcaaaacggacaataagacgggagaactgctacat
atcctgaaaaggatagacggcagcgcaattatctatgtccgcaacaggagacgcaccaaa
gaaatcaccgaattattaatgcaggaaggcattaccgccgacttctatcatgccggactg
gacaatgccgtaaaagacctccggcagaaacgctggcaaaacggagaaatccgcgtcatg
gtagccaccaacgctttcggcatgggcatcgacaagcctgatgtccgtatcgtactgcat
atcgaccttcccgactctcccgaagcgtactttcaagaagccggacgggcaggaagggac
gggctgaaagcctatgccgttatcctgtatgccaaatccgacaaaatgacattgcacaaa
cgggtggcggacactttccccgaaaaagaatatatcctccaggtatacgaacatctgcaa
tattactaccaaatggccatgggtgacggattccaatgtatccgtgagttcaacctggaa
gaattttgcaggaagttcaaatacttccccgtgccggtggacagtgcgttgaaaatactg
acgcaagccggctatctggagtatacggacgaacaggacaatgcttcccgcattcttttt
acaatccggcgggacgagctgtataaactacgggaaatgggtacggaagcggaaactctg
atacagaccattctccgttcctacacgggagtatttaccgattatgcttatatcagcgaa
gacacactggctatccgcaccggattgacacgccagcaaatttataatatattggtgaca
ctgaccaaacgccgtatcgtagattatatcccgcacaaaaagacaccttatataatatac
acgcgcgagcggctggaactacgttacctgcacattccggcttctgtctacgaagagcgc
aaagcccggtacgaagcacgtatcaaagccatggaagaatatgtcacttccgaaagcgtt
tgccggagccggatgttgcttcgttatttcggagaaaaaaatgagcataactgcaagcaa
tgcgacgtctgtctgaatcgtcacgaaacggactgcctgcccgaagactctttcagagaa
atgagaaaacaaatcctggaactgcttgcccggaaaagtttgccccctgccggaatagcg
aatgccattgaagcagaaagagaagatatcagccgggtaatccaatatttattggaagaa
ggtgagttgaagatgcaggacggaatgttacatatatcaaaataa
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