KEGG   Bacteroides caccae: CGC64_08075
Entry
CGC64_08075       CDS       T05064                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bcac  Bacteroides caccae
Pathway
bcac02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bcac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CGC64_08075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcac03021]
    CGC64_08075
Transcription machinery [BR:bcac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CGC64_08075
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_ECF Sigma70_r2 HTH_30 HTH_10 HTH_AsnC-type HTH_Tnp_ISL3 HTH_38 GerE HTH_24 HTH_23 HTH_28 DUF2774 Toxin_YhaV UPF0122 DUF6063 HTH_20 HTH_11 Xre-like-HTH HTH_8 HTH_Mga CDI_Immunity_Comp HTH_40 TnsD LPD38 DUF6362 DUF3095
Other DBs
NCBI-ProteinID: ASM65922
LinkDB
Position
complement(2077366..2077941)
AA seq 191 aa
MKETYRSENDFLLSAVRHGDQKAFDTLFRKYYPMLCAYGHRFVDLEDAEEIVEDSLLWIW
ENRETLVIESSLSSYLFKMVYRRALNKLAHIDATQRADTRFYEEMQEMLQDTDYYQMEEL
TKRIEEAIAALPESYRESFVMHRFRDMSYKEIAETLGVSPKTIDYRIQQALKQLRTDLKD
YLPLLLPILFP
NT seq 576 nt   +upstreamnt  +downstreamnt
atgaaagaaacctaccgctcagaaaacgatttcttattatcagccgtccgacacggagat
caaaaagctttcgacacgctgtttcgaaagtattatccgatgctttgtgcatacggtcat
cggtttgttgatctggaagatgcggaagaaattgtagaagactctcttttatggatttgg
gaaaaccgggaaactcttgtcattgaatcttcactgagttcctaccttttcaaaatggtg
taccgcagggctttaaacaaactcgcgcatatcgacgccacccaacgggctgatacccgt
ttttatgaagaaatgcaggaaatgctgcaagatacggactactatcagatggaagaactg
accaaacgaattgaggaggctatcgcagcgctacccgaaagctatcgggagtcttttgtg
atgcaccgtttccgggacatgagttacaaagagatcgccgaaacactgggagtatcaccc
aaaacaatagattaccgtatccagcaagctttgaagcaactgcgcacggacttgaaagat
tatcttccgttactactgccgattctatttccttaa

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