KEGG   Bacteroides caccae: CGC64_08460
Entry
CGC64_08460       CDS       T05064                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bcac  Bacteroides caccae
Pathway
bcac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGC64_08460 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcac03019]
    CGC64_08460 (rny)
Messenger RNA biogenesis [BR:bcac03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CGC64_08460 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 KH-I_KHDC4-BBP AAA_15 VTT_dom Cas3_HD
Other DBs
NCBI-ProteinID: ASM65990
UniProt: A0A174R7M9
LinkDB
Position
complement(2195614..2197149)
AA seq 511 aa
MIAIIATAIACFIVGGLLSYILFRYALKSKYDNVLKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQREMVLSQRQEEIQRKKMEAEAVKENLEAQLVIVDKK
KEELDKLQQQEIEKLETISGLSAEEAKERLVESLKEEAKTQAQSFINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgatagcaataatagcaacagcaattgcttgcttcatcgtaggaggattactttcatac
atactattccggtatgcactgaaatccaaatacgacaacgtcctgaaagaagcggagacg
gaagctgaagtaattaagaaaaacaagctgctggaagtgaaggagaaattcctgaacaaa
aaggcggatttggaaaaggaagtggcactgcgtaatcagaagatccagcaggcggaaaac
aaattgaaacagcgtgaaatggtactcagccagcgtcaggaggaaatccagcgcaagaaa
atggaagccgaggctgtaaaagaaaacctggaagcgcagcttgttattgttgacaagaag
aaagaggaactggacaaactgcaacagcaggaaatcgagaaactggaaacaatctccgga
ctgtctgccgaagaagcaaaagaacgtctggtagaatcactgaaagaagaagctaaaacg
caggctcaatcattcatcaacgatattatggatgatgccaaactgactgccagcaaagaa
gcaaaacgtatcgttatccagtctatccaacgggtagctacggaaactgcaatagaaaac
tccgtaacggtattccatatcgaatcggatgaaatcaaaggacgtatcatcggacgtgaa
ggacgtaatatccgtgctttggaagcagccaccggtgtggaaatcgttgttgatgatact
ccggaagcaatcgttctttccgcattcgacccggttcgacgtgaaattgcccgtctggca
ctgcatcagcttgtgaccgacggacgtatccaccccgcacgcatcgaagaagtagtggct
aaagtacgtaaacaagtagaagaagaaatcatagaaaccggtaaacgtacaacgatcgac
cttggtatccatggtctgcatcctgaactgatccgtattatcggtaaaatgaaatatcgt
tcttcatatggacagaacctgttgcaacatgcacgtgagacagccaatctctgcgctgta
atggcatcggaactgggtctgaacccgaagaaggcgaaacgtgccggattgttgcatgat
ataggtaaagtgcctgatgaagaaccggaattgccacacgcattgctgggtatgaaactc
gcagagaaatacaaagagaaaccggacatctgcaacgctatcggtgctcaccacgatgag
acggaaatgacgagtctgttggctcctatcgtacaggtttgtgatgctatatccggtgca
cgtccgggagcacgccgcgaaatcgtagaggcttatatcaagcgtctgaatgatctcgaa
caattggcgatgtcttatccgggtgtaaccaagacttatgcaatccaggcaggacgcgaa
ctccgcgttatcgttggtgcggataagattgacgacaagcagacagaaagcctgtccggc
gaaatcgctaagaaaatccaggatgagatgacttatccgggacaagtgaagattaccgta
attcgtgaaacacgtgcggttagcttcgctaaataa

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