Bacteroides caccae: CGC64_08460
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Entry
CGC64_08460 CDS
T05064
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bcac
Bacteroides caccae
Pathway
bcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC64_08460 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcac03019
]
CGC64_08460 (rny)
Messenger RNA biogenesis [BR:
bcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGC64_08460 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
AAA_15
VTT_dom
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ASM65990
UniProt:
A0A174R7M9
LinkDB
All DBs
Position
complement(2195614..2197149)
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AA seq
511 aa
AA seq
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MIAIIATAIACFIVGGLLSYILFRYALKSKYDNVLKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQREMVLSQRQEEIQRKKMEAEAVKENLEAQLVIVDKK
KEELDKLQQQEIEKLETISGLSAEEAKERLVESLKEEAKTQAQSFINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaataatagcaacagcaattgcttgcttcatcgtaggaggattactttcatac
atactattccggtatgcactgaaatccaaatacgacaacgtcctgaaagaagcggagacg
gaagctgaagtaattaagaaaaacaagctgctggaagtgaaggagaaattcctgaacaaa
aaggcggatttggaaaaggaagtggcactgcgtaatcagaagatccagcaggcggaaaac
aaattgaaacagcgtgaaatggtactcagccagcgtcaggaggaaatccagcgcaagaaa
atggaagccgaggctgtaaaagaaaacctggaagcgcagcttgttattgttgacaagaag
aaagaggaactggacaaactgcaacagcaggaaatcgagaaactggaaacaatctccgga
ctgtctgccgaagaagcaaaagaacgtctggtagaatcactgaaagaagaagctaaaacg
caggctcaatcattcatcaacgatattatggatgatgccaaactgactgccagcaaagaa
gcaaaacgtatcgttatccagtctatccaacgggtagctacggaaactgcaatagaaaac
tccgtaacggtattccatatcgaatcggatgaaatcaaaggacgtatcatcggacgtgaa
ggacgtaatatccgtgctttggaagcagccaccggtgtggaaatcgttgttgatgatact
ccggaagcaatcgttctttccgcattcgacccggttcgacgtgaaattgcccgtctggca
ctgcatcagcttgtgaccgacggacgtatccaccccgcacgcatcgaagaagtagtggct
aaagtacgtaaacaagtagaagaagaaatcatagaaaccggtaaacgtacaacgatcgac
cttggtatccatggtctgcatcctgaactgatccgtattatcggtaaaatgaaatatcgt
tcttcatatggacagaacctgttgcaacatgcacgtgagacagccaatctctgcgctgta
atggcatcggaactgggtctgaacccgaagaaggcgaaacgtgccggattgttgcatgat
ataggtaaagtgcctgatgaagaaccggaattgccacacgcattgctgggtatgaaactc
gcagagaaatacaaagagaaaccggacatctgcaacgctatcggtgctcaccacgatgag
acggaaatgacgagtctgttggctcctatcgtacaggtttgtgatgctatatccggtgca
cgtccgggagcacgccgcgaaatcgtagaggcttatatcaagcgtctgaatgatctcgaa
caattggcgatgtcttatccgggtgtaaccaagacttatgcaatccaggcaggacgcgaa
ctccgcgttatcgttggtgcggataagattgacgacaagcagacagaaagcctgtccggc
gaaatcgctaagaaaatccaggatgagatgacttatccgggacaagtgaagattaccgta
attcgtgaaacacgtgcggttagcttcgctaaataa
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